RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 NLE1Q9NVX2 485 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 QPCTLQ9NXS2 382 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 PCDHB11Q9Y5F2 797 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 TRAV18A0A075B6X5 111 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 SOBPA7XYQ1 873 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 F5H5P2 479 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 H7BY64 318 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 POLR1CO15160 346 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 GRID2O43424 1007 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 PRKYO43930 277 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 SNRNP70P08621 437 aaKnown RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 UCHL1P09936 223 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 FBXO45P0C2W1 286 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 HSD3B1P14060 373 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 SMPD1P17405 629 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 S1PR1P21453 382 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 DCTP40126 519 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 HTR6P50406 440 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 SNU13P55769 128 aaKnown RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 NNATQ16517 81 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 PCGF3Q3KNV8 242 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 TP53INP2Q8IXH6 220 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 DTWD1Q8N5C7 304 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 ZNF611Q8N823 705 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 TEX19Q8NA77 164 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 SYT14Q8NB59 555 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 FAM83FQ8NEG4 500 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 OR7G1Q8NGA0 311 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 TFAP2CQ92754 450 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 PRAP1Q96NZ9 151 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 PSKH2Q96QS6 385 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 INPP5KQ9BT40 448 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 TXLNGYQ9BZA5 131 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 KCNK13Q9HB14 408 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 KCNK6Q9Y257 313 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 CACNG2Q9Y698 323 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 HPGDSO60760 199 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 CBSLP0DN79 551 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 CBSP35520 551 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 DLSTP36957 453 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 PITPNBP48739 271 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 EMX1Q04741 257 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 NIPAL4Q0D2K0 466 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 APOFQ13790 326 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 ALG10BQ5I7T1 473 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 ENPP7Q6UWV6 458 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 C3P1Q6ZMU1 363 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 KCTD20Q7Z5Y7 419 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 NATD1Q8N6N6 113 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 FRZBQ92765 325 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 SHISA4Q96DD7 197 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 EPYCQ99645 322 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 PBDC1Q9BVG4 233 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 MFFQ9GZY8 342 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 NTN4Q9HB63 628 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 ZNF334Q9HCZ1 680 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 SLAMF7Q9NQ25 335 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 GPATCH2Q9NW75 528 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 KCNS2Q9ULS6 477 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 ERVW-1Q9UQF0 538 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 GON4LQ3T8J9 2241 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 TRIM64A6NGJ6 449 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 RHPN2P1A8MT19 583 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 CTDSP2O14595 271 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 AQP9O43315 295 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 MT-ND4P03905 459 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 PRSS56P0CW18 603 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 ACPPP15309 386 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 ATP5A1P25705 553 aaKnown RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 LEPRP48357 1165 aaKnown RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 VSX2P58304 361 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 GPR19Q15760 415 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 SGCBQ16585 318 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 SLC35G1Q2M3R5 365 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 PLEKHN1Q494U1 663 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 MS4A13Q5J8X5 152 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 IER5LQ5T953 404 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 TXNDC8Q6A555 127 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 HACD2Q6Y1H2 254 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 PROKR1Q8TCW9 393 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 PHB2Q99623 299 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 QRSL1Q9H0R6 528 aaKnown RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 SIAEQ9HAT2 523 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 Q9N2J8 555 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 LRFN1Q9P244 771 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 KLHL9Q9P2J3 617 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 COPS3Q9UNS2 423 aa7.29□□□□□ -1.24
CTNND1-223ENST00000529986 AK6Q9Y3D8 172 aaKnown RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 LSM5Q9Y4Y9 91 aaKnown RBP7.29□□□□□ -1.24
CTNND1-223ENST00000529986 ZNF850A8MQ14 1090 aa7.28□□□□□ -1.24
CTNND1-223ENST00000529986 SLC34A2O95436 690 aa7.28□□□□□ -1.24
CTNND1-223ENST00000529986 S1PR4O95977 384 aa7.28□□□□□ -1.24
CTNND1-223ENST00000529986 CDK1P06493 297 aa7.28□□□□□ -1.24
CTNND1-223ENST00000529986 CD3GP09693 182 aa7.28□□□□□ -1.24
CTNND1-223ENST00000529986 RHCEP18577 417 aa7.28□□□□□ -1.24
CTNND1-223ENST00000529986 IL32P24001 234 aa7.28□□□□□ -1.24
CTNND1-223ENST00000529986 HOXC12P31275 282 aa7.28□□□□□ -1.24
CTNND1-223ENST00000529986 CASP3P42574 277 aa7.28□□□□□ -1.24
CTNND1-223ENST00000529986 TRAM1Q15629 374 aa7.28□□□□□ -1.24
CTNND1-223ENST00000529986 LRIT3Q3SXY7 679 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms