RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 FNDC11Q9BVV2 318 aa10.09□□□□□ -0.79
PUF60-213ENST00000528999 ACTRT3Q9BYD9 372 aa10.09□□□□□ -0.79
PUF60-213ENST00000528999 POLR2J2Q9GZM3 115 aaKnown RBP10.09□□□□□ -0.79
PUF60-213ENST00000528999 POLR2J3Q9H1A7 115 aaKnown RBP10.09□□□□□ -0.79
PUF60-213ENST00000528999 MMP27Q9H306 513 aa10.09□□□□□ -0.79
PUF60-213ENST00000528999 SERHL2Q9H4I8 314 aa10.09□□□□□ -0.79
PUF60-213ENST00000528999 SLC25A19Q9HC21 320 aa10.09□□□□□ -0.79
PUF60-213ENST00000528999 LYRM4Q9HD34 91 aa10.09□□□□□ -0.79
PUF60-213ENST00000528999 GIN1Q9NXP7 522 aa10.09□□□□□ -0.79
PUF60-213ENST00000528999 SPHK1Q9NYA1 384 aa10.09□□□□□ -0.79
PUF60-213ENST00000528999 SCHIP1Q9P0W5 487 aaPredicted RBP10.09□□□□□ -0.79
PUF60-213ENST00000528999 ZNF624Q9P2J8 865 aaPredicted RBP10.09□□□□□ -0.79
PUF60-213ENST00000528999 MKLN1Q9UL63 735 aa10.09□□□□□ -0.79
PUF60-213ENST00000528999 A4GNTQ9UNA3 340 aa10.09□□□□□ -0.79
PUF60-213ENST00000528999 IFT52Q9Y366 437 aa10.09□□□□□ -0.79
PUF60-213ENST00000528999 RPL36Q9Y3U8 105 aaKnown RBP10.09□□□□□ -0.79
PUF60-213ENST00000528999 HEMK1Q9Y5R4 338 aaPredicted RBP10.09□□□□□ -0.79
PUF60-213ENST00000528999 TRPM6Q9BX84 2022 aa10.09□□□□□ -0.79
PUF60-213ENST00000528999 PRAMEF27A3QJZ7 478 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 POM121BA6NF01 834 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 SNTNA6NMZ2 147 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 EFCAB9A8MZ26 197 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 TLR4O00206 839 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 ZSCAN9O15535 394 aaPredicted RBP10.08□□□□□ -0.8
PUF60-213ENST00000528999 UGT2B17O75795 530 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 AIFM1O95831 613 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 FADS2O95864 444 aaKnown RBP10.08□□□□□ -0.8
PUF60-213ENST00000528999 TNFP01375 233 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 IGLV3-19P01714 112 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 HMGN2P05204 90 aaKnown RBP10.08□□□□□ -0.8
PUF60-213ENST00000528999 SLC35G6P0C7Q6 338 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 NR2F6P10588 404 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 PRKAR1BP31321 381 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 TGFBR2P37173 567 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 SLC19A1P41440 591 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 RABIFP47224 123 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 MAN2A2P49641 1150 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 RPS26P62854 115 aaKnown RBP10.08□□□□□ -0.8
PUF60-213ENST00000528999 RHAGQ02094 409 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 ST3GAL4Q11206 333 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 TIGD6Q17RP2 521 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 RPS26P11Q5JNZ5 115 aaPredicted RBP10.08□□□□□ -0.8
PUF60-213ENST00000528999 PLAG1Q6DJT9 500 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 HEPHL1Q6MZM0 1159 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 C16orf87Q6PH81 154 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 C19orf48Q6RUI8 117 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 CASP12Q6UXS9 341 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 CCDC81Q6ZN84 652 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 USP53Q70EK8 1073 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 USP43Q70EL4 1123 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 SLC46A3Q7Z3Q1 461 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 SLCO6A1Q86UG4 719 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 CCDC103Q8IW40 242 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 CCDC116Q8IYX3 515 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 FAM26EQ8N5C1 309 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 ZNF655Q8N720 491 aaPredicted RBP10.08□□□□□ -0.8
PUF60-213ENST00000528999 NUP43Q8NFH3 380 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 OR9Q2Q8NGE9 314 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 ZNF675Q8TD23 568 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 GNPDA2Q8TDQ7 276 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 KLHL6Q8WZ60 621 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 GTPBP3Q969Y2 492 aaKnown RBP10.08□□□□□ -0.8
PUF60-213ENST00000528999 COX4I2Q96KJ9 171 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 PRRC1Q96M27 445 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 NRTNQ99748 197 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 ARHGDIGQ99819 225 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 TMEM121BQ9BXQ6 578 aaPredicted RBP10.08□□□□□ -0.8
PUF60-213ENST00000528999 MTHFD2LQ9H903 347 aaPredicted RBP10.08□□□□□ -0.8
PUF60-213ENST00000528999 KLHL28Q9NXS3 571 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 KCMF1Q9P0J7 381 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 PTGFRNQ9P2B2 879 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 APOBEC3BQ9UH17 382 aaKnown RBP10.08□□□□□ -0.8
PUF60-213ENST00000528999 OSGIN1Q9UJX0 560 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 SLC13A4Q9UKG4 626 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 ZNF232Q9UNY5 417 aa10.08□□□□□ -0.8
PUF60-213ENST00000528999 KIR2DS5A0A0G2JLQ3 304 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 A0A0G2JNG1 304 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 TRBV4-1A0A0J9YWV2 114 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 PRR23AA6NEV1 266 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 PRAMEF26H0Y7S4 382 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 KIR2DS3K7RE56 304 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 BTN3A3O00478 584 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 AIREO43918 545 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 OR10H3O60404 316 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 ERAL1O75616 437 aaKnown RBP10.07□□□□□ -0.8
PUF60-213ENST00000528999 ALPPP05187 535 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 RPLP0P05388 317 aaKnown RBP10.07□□□□□ -0.8
PUF60-213ENST00000528999 GUSBP08236 651 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 MAT2AP31153 395 aaKnown RBP10.07□□□□□ -0.8
PUF60-213ENST00000528999 CSTF2P33240 577 aaKnown RBP eCLIP10.07□□□□□ -0.8
PUF60-213ENST00000528999 CNR2P34972 360 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 CLK1P49759 484 aaKnown RBP10.07□□□□□ -0.8
PUF60-213ENST00000528999 XKP51811 444 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 PPP2CBP62714 309 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 PPP2CAP67775 309 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 BTN3A2P78410 334 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 TNFRSF17Q02223 184 aa10.07□□□□□ -0.8
PUF60-213ENST00000528999 ILF3Q12906 894 aaKnown RBP eCLIP10.07□□□□□ -0.8
PUF60-213ENST00000528999 GANABQ14697 944 aaKnown RBP10.07□□□□□ -0.8
PUF60-213ENST00000528999 KIR2DS5Q14953 304 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms