RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SREK1Q8WXA9 508 aaKnown RBP11.18□□□□□ -0.62
TRAPPC4-209ENST00000528230 ADIPOR1Q96A54 375 aa11.18□□□□□ -0.62
TRAPPC4-209ENST00000528230 ERP27Q96DN0 273 aa11.18□□□□□ -0.62
TRAPPC4-209ENST00000528230 CNRIP1Q96F85 164 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC4-209ENST00000528230 MAGED4Q96JG8 741 aa11.18□□□□□ -0.62
TRAPPC4-209ENST00000528230 GAL3ST4Q96RP7 486 aa11.18□□□□□ -0.62
TRAPPC4-209ENST00000528230 SMC6Q96SB8 1091 aa11.18□□□□□ -0.62
TRAPPC4-209ENST00000528230 TSPAN10Q9H1Z9 355 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC4-209ENST00000528230 PLSCR2Q9NRY7 297 aa11.18□□□□□ -0.62
TRAPPC4-209ENST00000528230 MAT2BQ9NZL9 334 aa11.18□□□□□ -0.62
TRAPPC4-209ENST00000528230 CNIH4Q9P003 139 aa11.18□□□□□ -0.62
TRAPPC4-209ENST00000528230 SUCOQ9UBS9 1254 aaKnown RBP11.18□□□□□ -0.62
TRAPPC4-209ENST00000528230 UTS2RQ9UKP6 389 aa11.18□□□□□ -0.62
TRAPPC4-209ENST00000528230 EXPH5Q8NEV8 1989 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 SPTBN1Q01082 2364 aaKnown RBP11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 USP9YO00507 2555 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 ACOT7O00154 380 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 SLC28A1O00337 649 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 CCL21O00585 134 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 AZIN1O14977 448 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 NPHS1O60500 1241 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 BCAS2O75934 225 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 GLSO94925 669 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 IL3P08700 152 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 ANXA4P09525 319 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 ALDH3A1P30838 453 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 NR0B1P51843 470 aaKnown RBP11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 ZNF763Q0D2J5 394 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 CEBPEQ15744 281 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 NTRK2Q16620 822 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 FAM47EQ6ZV65 393 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 MAMDC2Q7Z304 686 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 SLC22A16Q86VW1 577 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 CHERPQ8IWX8 916 aaKnown RBP11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 MMP21Q8N119 569 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 LRRC25Q8N386 305 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 ZNF675Q8TD23 568 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 FAM111AQ96PZ2 611 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 BRINP2Q9C0B6 783 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 IL1RL2Q9HB29 575 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 TNFRSF12AQ9NP84 129 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 GIMAP4Q9NUV9 329 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 TAS2R7Q9NYW3 318 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 SLC17A7Q9P2U7 560 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 CCL27Q9Y4X3 112 aa11.17□□□□□ -0.62
TRAPPC4-209ENST00000528230 PINLYPA6NC86 204 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 ANKRD33BA6NCL7 494 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 PRRG2O14669 202 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 TP53I11O14683 189 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 RGS14O43566 566 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 HS6ST1O60243 411 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 SPAG7O75391 227 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 CHEK2O96017 543 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 CCL3P10147 92 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 ABOP16442 354 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 NAGAP17050 411 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 DDCP20711 480 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 GPX3P22352 226 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 SOX18P35713 384 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 SERPINB5P36952 375 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 RFC3P40938 356 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 TMED10P49755 219 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 NRG3P56975 720 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 DCAF7P61962 342 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 PPIAP62937 165 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 PLGLB1Q02325 96 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 C2orf80Q0P641 193 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 FOXO1Q12778 655 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 KIAA0040Q15053 153 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 C3AR1Q16581 482 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 CMPK2Q5EBM0 449 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 TBCELQ5QJ74 424 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 FAM111BQ6SJ93 734 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 CROCCP2Q86T23 111 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 CCDC116Q8IYX3 515 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 CLYBLQ8N0X4 340 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 EID3Q8N140 333 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 FBXW8Q8N3Y1 598 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 OR52N2Q8NGI0 321 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 SECISBP2Q96T21 854 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 TTTY12Q9BZ98 90 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 ZDHHC11Q9H8X9 412 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 EML4Q9HC35 981 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 MYNNQ9NPC7 610 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 SLC35C2Q9NQQ7 365 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 PRODH2Q9UF12 536 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 NPFFR2Q9Y5X5 522 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 CHCHD2Q9Y6H1 151 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 NCOA6Q14686 2063 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 DNAJC13O75165 2243 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 HECTD1Q9ULT8 2610 aa11.16□□□□□ -0.62
TRAPPC4-209ENST00000528230 ZNF407Q9C0G0 2248 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 A0A1B0GTH9 108 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 RGS16O15492 202 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 TYROBPO43914 113 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 ZG16O60844 167 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 SEC22BO75396 215 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 CLDN1O95832 211 aa11.15□□□□□ -0.62
TRAPPC4-209ENST00000528230 ESRRAP11474 423 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms