RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 MINDY2Q8NBR6 621 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 CNRIP1Q96F85 164 aaPredicted RBP14.48□□□□□ -0.09
USH1C-207ENST00000527720 ALOXE3Q9BYJ1 711 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 PBX4Q9BYU1 374 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 FGF22Q9HCT0 170 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 SPHK1Q9NYA1 384 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 SCHIP1Q9P0W5 487 aaPredicted RBP14.48□□□□□ -0.09
USH1C-207ENST00000527720 FAM227AF5H4B4 570 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 PGRMC2O15173 223 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 EMC8O43402 210 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 ASNA1O43681 348 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 LGI1O95970 557 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 F3P13726 295 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 GADD45AP24522 165 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 POU1F1P28069 291 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 MPIP34949 423 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 XKP51811 444 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 GPR19Q15760 415 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 INAQ16352 499 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 ARMCX4Q5H9R4 360 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 RBM45Q8IUH3 476 aaKnown RBP14.48□□□□□ -0.09
USH1C-207ENST00000527720 FAM20CQ8IXL6 584 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 KBTBD8Q8NFY9 601 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 SLC7A13Q8TCU3 470 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 NR4A3Q92570 626 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 PINK1Q9BXM7 581 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 RACGAP1Q9H0H5 632 aa14.48□□□□□ -0.09
USH1C-207ENST00000527720 POLR2J3Q9H1A7 115 aaKnown RBP14.48□□□□□ -0.09
USH1C-207ENST00000527720 LINC01565O15544 149 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 PROM1O43490 865 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 HMGN2P05204 90 aaKnown RBP14.47□□□□□ -0.09
USH1C-207ENST00000527720 CHRM5P08912 532 aaPredicted RBP14.47□□□□□ -0.09
USH1C-207ENST00000527720 MAT2AP31153 395 aaKnown RBP14.47□□□□□ -0.09
USH1C-207ENST00000527720 RGS6P49758 472 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 RPS15AP62244 130 aaKnown RBP14.47□□□□□ -0.09
USH1C-207ENST00000527720 LEXMQ3ZCV2 418 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 NIPAL1Q6NVV3 410 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 CASP12Q6UXS9 341 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 AMIGO1Q86WK6 493 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 LACC1Q8IV20 430 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 NLGN4XQ8N0W4 816 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 AMER2Q8N7J2 671 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 IL17RCQ8NAC3 791 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 MRPL38Q96DV4 380 aaKnown RBP14.47□□□□□ -0.09
USH1C-207ENST00000527720 PRRC1Q96M27 445 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 RPP25Q9BUL9 199 aaKnown RBP14.47□□□□□ -0.09
USH1C-207ENST00000527720 FNDC11Q9BVV2 318 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 MROQ9BYG7 248 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 C3orf14Q9HBI5 128 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 SLC6A14Q9UN76 642 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 PCDHGA3Q9Y5H0 932 aa14.47□□□□□ -0.09
USH1C-207ENST00000527720 GLOD5A6NK44 160 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 ISM1B1AKI9 464 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 M0R129 80 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 ZW10O43264 779 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 PRKRAO75569 313 aaKnown RBP14.46□□□□□ -0.09
USH1C-207ENST00000527720 CHRM4P08173 479 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 BMP4P12644 408 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 HOXB3P14651 431 aaPredicted RBP14.46□□□□□ -0.09
USH1C-207ENST00000527720 CERS1P27544 350 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 LIMK1P53667 647 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.46□□□□□ -0.09
USH1C-207ENST00000527720 FUT5Q11128 374 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 ATP1A4Q13733 1029 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 SHHQ15465 462 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 TIMM50Q3ZCQ8 353 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 ZNF404Q494X3 552 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 C19orf48Q6RUI8 117 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 USP30Q70CQ3 517 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 PAQR7Q86WK9 346 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 CCDC116Q8IYX3 515 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 OR8J1Q8NGP2 316 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 MCFD2Q8NI22 146 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 LCN9Q8WX39 176 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 GAL3ST3Q96A11 431 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 SLC22A18Q96BI1 424 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 DSN1Q9H410 356 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 ZBTB20Q9HC78 741 aaPredicted RBP14.46□□□□□ -0.09
USH1C-207ENST00000527720 C11orf16Q9NQ32 467 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 CALML5Q9NZT1 146 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 CCDC59Q9P031 241 aaKnown RBP14.46□□□□□ -0.09
USH1C-207ENST00000527720 APOBEC3BQ9UH17 382 aaKnown RBP14.46□□□□□ -0.09
USH1C-207ENST00000527720 KLF15Q9UIH9 416 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 FBXW2Q9UKT8 454 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 PCOLCE2Q9UKZ9 415 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 IFT52Q9Y366 437 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 A0A1W2PQF6 199 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 SYT5O00445 386 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 SLC31A1O15431 190 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 NME6O75414 186 aaPredicted RBP14.46□□□□□ -0.09
USH1C-207ENST00000527720 ASGR2P07307 311 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 HOXB2P14652 356 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 PRKAG1P54619 331 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 HYAL1Q12794 435 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 TARDBPQ13148 414 aaKnown RBP eCLIP14.46□□□□□ -0.09
USH1C-207ENST00000527720 LASP1Q14847 261 aaKnown RBP14.46□□□□□ -0.09
USH1C-207ENST00000527720 RNLSQ5VYX0 342 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 TUBA3EQ6PEY2 450 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 MACROD1Q9BQ69 325 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 WFDC6Q9BQY6 131 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms