RNA–Protein interactions for RNA: ENST00000526866.5

CDC27-203, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-203ENST00000526866 NXNL1Q96CM4 212 aa16.91■□□□□ 0.3
CDC27-203ENST00000526866 WDYHV1Q96HA8 205 aa16.91■□□□□ 0.3
CDC27-203ENST00000526866 UGT2B28Q9BY64 529 aa16.91■□□□□ 0.3
CDC27-203ENST00000526866 ACTR8Q9H981 624 aa16.91■□□□□ 0.3
CDC27-203ENST00000526866 WDR41Q9HAD4 459 aa16.91■□□□□ 0.3
CDC27-203ENST00000526866 TEX10Q9NXF1 929 aaPredicted RBP16.91■□□□□ 0.3
CDC27-203ENST00000526866 ANGPTL3Q9Y5C1 460 aa16.91■□□□□ 0.3
CDC27-203ENST00000526866 SAR1BQ9Y6B6 198 aa16.91■□□□□ 0.3
CDC27-203ENST00000526866 DNHD1Q96M86 4753 aa16.91■□□□□ 0.3
CDC27-203ENST00000526866 MBD3L4A6NDZ8 208 aaPredicted RBP16.9■□□□□ 0.3
CDC27-203ENST00000526866 MBD3L3A6NE82 208 aaPredicted RBP16.9■□□□□ 0.3
CDC27-203ENST00000526866 LRRC14BA6NHZ5 514 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 MBD3L5A6NJ08 208 aaPredicted RBP16.9■□□□□ 0.3
CDC27-203ENST00000526866 CD8B2A6NJW9 211 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 H0YIV9 168 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 PGRMC2O15173 223 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 EIF3HO15372 352 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDC27-203ENST00000526866 GBAP04062 536 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 CASP3P42574 277 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 PHEXP78562 749 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 KEAP1Q14145 624 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 TOMM20Q15388 145 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 SF3B4Q15427 424 aaKnown RBP eCLIP16.9■□□□□ 0.33e-7■■■■□ 21.2
CDC27-203ENST00000526866 CPSF6Q16630 551 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDC27-203ENST00000526866 KBTBD12Q3ZCT8 623 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 NHSL2Q5HYW2 709 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 WIPI1Q5MNZ9 446 aaPredicted RBP16.9■□□□□ 0.3
CDC27-203ENST00000526866 PACS2Q86VP3 889 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 KIF18BQ86Y91 864 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 PRR22Q8IZ63 422 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 PPM1NQ8N819 430 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 MBD3L2Q8NHZ7 208 aaPredicted RBP16.9■□□□□ 0.3
CDC27-203ENST00000526866 ADIPOR1Q96A54 375 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 SECISBP2Q96T21 854 aaKnown RBP16.9■□□□□ 0.3
CDC27-203ENST00000526866 KCNF1Q9H3M0 494 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 PLEKHF2Q9H8W4 249 aa16.9■□□□□ 0.3
CDC27-203ENST00000526866 EEF1E1-BLOC1S5C9J1V9 151 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 GNB5O14775 395 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 EEF1E1O43324 174 aaKnown RBP16.89■□□□□ 0.29
CDC27-203ENST00000526866 CTSSP25774 331 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 PAFAH1B1P43034 410 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 TMED10P49755 219 aaKnown RBP16.89■□□□□ 0.29
CDC27-203ENST00000526866 CALCOCO2Q13137 446 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 CUL3Q13618 768 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 SETDB1Q15047 1291 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 OR52E8Q6IFG1 317 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 NUDT13Q86X67 352 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 GALNT12Q8IXK2 581 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 ZNF615Q8N8J6 731 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 KCTD4Q8WVF5 259 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 NTNG2Q96CW9 530 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 TMEM41AQ96HV5 264 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 OR10A5Q9H207 317 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 JKAMPQ9P055 326 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 WHRNQ9P202 907 aa16.89■□□□□ 0.29
CDC27-203ENST00000526866 GSTA2P09210 222 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 PIK3R1P27986 724 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 CRABP2P29373 138 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 OPRM1P35372 400 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 PIK3CGP48736 1102 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 NEK2P51955 445 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 NAGLUP54802 743 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 NRG3P56975 720 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 GNG11P61952 73 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 SORDQ00796 357 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 IRF9Q00978 393 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 FUT7Q11130 342 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 PFKFB4Q16877 469 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 CENPLQ8N0S6 344 aaPredicted RBP16.88■□□□□ 0.29
CDC27-203ENST00000526866 C9orf106Q8NAJ2 232 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 WDR20Q8TBZ3 569 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 ABTB1Q969K4 478 aaPredicted RBP16.88■□□□□ 0.29
CDC27-203ENST00000526866 REPS1Q96D71 796 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 SMR3AQ99954 134 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 ERP44Q9BS26 406 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 CALHM2Q9HA72 323 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 RNF11Q9Y3C5 154 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 MED12Q93074 2177 aa16.88■□□□□ 0.29
CDC27-203ENST00000526866 CLCA1A8K7I4 914 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 SYCE1LA8MT33 242 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 GFAPP14136 432 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 PTPN6P29350 595 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 SOX18P35713 384 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 SLCO1A2P46721 670 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 RPP38P78345 283 aaKnown RBP16.87■□□□□ 0.29
CDC27-203ENST00000526866 TIGD3Q6B0B8 471 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 YRDCQ86U90 279 aaKnown RBP16.87■□□□□ 0.29
CDC27-203ENST00000526866 FAM83FQ8NEG4 500 aaPredicted RBP16.87■□□□□ 0.29
CDC27-203ENST00000526866 RHEBL1Q8TAI7 183 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 NAPGQ99747 312 aaPredicted RBP16.87■□□□□ 0.29
CDC27-203ENST00000526866 PSD3Q9NYI0 1048 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 GRHL1Q9NZI5 618 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 DTX4Q9Y2E6 619 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 ACOT9Q9Y305 439 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 UGDHO60701 494 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 IL18BPO95998 194 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 TMIGD3P0DMS9 266 aaPredicted RBP16.87■□□□□ 0.29
CDC27-203ENST00000526866 ABCD3P28288 659 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 HOXC12P31275 282 aa16.87■□□□□ 0.29
CDC27-203ENST00000526866 LTBQ06643 244 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms