RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 Q5PR19 223 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 PLEKHS1Q5SXH7 462 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TPRG1LQ5T0D9 272 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 RPUSD3Q6P087 351 aaKnown RBP4.27□□□□□ -1.73
USP48-211ENST00000526044 IL27RAQ6UWB1 636 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TIFABQ6ZNK6 161 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 RNF144BQ7Z419 303 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 CCDC91Q7Z6B0 441 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TAF8Q7Z7C8 310 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 PARGQ86W56 976 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 GPSM1Q86YR5 675 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 ZNF547Q8IVP9 402 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 CEP97Q8IW35 865 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 SLC22A18ASQ8N1D0 253 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 DCLK2Q8N568 766 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 ZBTB2Q8N680 514 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 ACVR1CQ8NER5 493 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 PRSS33Q8NF86 280 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 OR2L2Q8NH16 312 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 C2CD4CQ8TF44 421 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 NAT14Q8WUY8 206 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 OR1E3Q8WZA6 343 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TMEM159Q96B96 161 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 PGM2Q96G03 612 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 CABS1Q96KC9 395 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 LINC00615Q96LM1 132 aaPredicted RBP4.27□□□□□ -1.73
USP48-211ENST00000526044 NDNQ99608 321 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 GPR21Q99679 349 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 GPR22Q99680 433 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 OLFM1Q99784 485 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TREX2Q9BQ50 279 aaPredicted RBP4.27□□□□□ -1.73
USP48-211ENST00000526044 WACQ9BTA9 647 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 NUSAP1Q9BXS6 441 aaKnown RBP4.27□□□□□ -1.73
USP48-211ENST00000526044 CADM1Q9BY67 442 aaKnown RBP4.27□□□□□ -1.73
USP48-211ENST00000526044 KRTAP1-5Q9BYS1 174 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 STMN4Q9H169 189 aaPredicted RBP4.27□□□□□ -1.73
USP48-211ENST00000526044 MAP6D1Q9H9H5 199 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 CAB39LQ9H9S4 337 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 POPDC3Q9HBV1 291 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TMBIM4Q9HC24 238 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 FGF22Q9HCT0 170 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 GALPQ9UBC7 116 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 SLC23A2Q9UGH3 650 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 DCDC2Q9UHG0 476 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 LGALS13Q9UHV8 139 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TRMT6Q9UJA5 497 aaKnown RBP4.27□□□□□ -1.73
USP48-211ENST00000526044 SLC13A4Q9UKG4 626 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 ACSL5Q9ULC5 683 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 RUVBL2Q9Y230 463 aaKnown RBP4.27□□□□□ -1.73
USP48-211ENST00000526044 DNAJC16Q9Y2G8 782 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 ACOT9Q9Y305 439 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 PCDHGA5Q9Y5G8 931 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 SLCO1B1Q9Y6L6 691 aa4.27□□□□□ -1.73
USP48-211ENST00000526044 TMEM131Q92545 1883 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 ATXN2Q99700 1313 aaKnown RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 TP53BP1Q12888 1972 aaPredicted RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 A0A096LPK6 155 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 SLC5A10A0PJK1 596 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 NEMP2A6NFY4 417 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 GOLGA8RI6L899 631 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 LIN7AO14910 233 aaPredicted RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 SCAMP1O15126 338 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 ZBTB14O43829 449 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 GPC4O75487 556 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 SLCO2B1O94956 709 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 KLHL2O95198 593 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 C2P06681 752 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 RETP07949 1114 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 CSF1P09603 554 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 CCDC166P0CW27 439 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 MPC1LP0DKB6 136 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 FCGR2AP12318 317 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 ATP6V1B1P15313 513 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 PBLDP30039 288 aaPredicted RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 PEX19P40855 299 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 SLC26A3P40879 764 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 ARRB1P49407 418 aaPredicted RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 SERPINB8P50452 374 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 CLCNKAP51800 687 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 PGGT1BP53609 377 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 ATXN3P54252 364 aaPredicted RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 P2RX3P56373 397 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 IRX4P78413 519 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 ILF3Q12906 894 aaKnown RBP eCLIP4.26□□□□□ -1.73
USP48-211ENST00000526044 RPA4Q13156 261 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 GPS2Q13227 327 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 C1orf61Q13536 156 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 NFE2L1Q14494 772 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 ELOCQ15369 112 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 HLA-BQ31612 363 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 SYTL3Q4VX76 610 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 TAF1BQ53T94 588 aaPredicted RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 HSP90B2PQ58FF3 399 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 ACSBG2Q5FVE4 666 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 WASHC2DQ5SRD0 308 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 TMEM268Q5VZI3 342 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 TMEM207Q6UWW9 146 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 ABRAXAS1Q6UWZ7 409 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 CYHR1Q6ZMK1 362 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 FAM83HQ6ZRV2 1179 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms