RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 USH1CQ9Y6N9 552 aa11.35□□□□□ -0.59
CHKA-203ENST00000525155 NUP210LQ5VU65 1888 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 DCHS2Q6V1P9 2916 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 OR5H15A6NDH6 313 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 SAGE2PA6NJ88 616 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 GLOD5A6NK44 160 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 PGRMC2O15173 223 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 FGF17O60258 216 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 TBX19O60806 448 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 PRAMEF2O60811 474 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 LDB3O75112 727 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 BCKDHAP12694 445 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 PORP16435 677 aaPredicted RBP11.34□□□□□ -0.59
CHKA-203ENST00000525155 SDC1P18827 310 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 TNNI3P19429 210 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 CSNK2A2P19784 350 aaPredicted RBP11.34□□□□□ -0.59
CHKA-203ENST00000525155 PRPS1L1P21108 318 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 MPIP34949 423 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 HPCAL1P37235 193 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 CD96P40200 585 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 MDH1P40925 334 aaKnown RBP11.34□□□□□ -0.59
CHKA-203ENST00000525155 ALDH9A1P49189 494 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 XKP51811 444 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 IRX1P78414 480 aaPredicted RBP11.34□□□□□ -0.59
CHKA-203ENST00000525155 ACER2Q5QJU3 275 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 IL23RQ5VWK5 629 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 SPINK14Q6IE38 97 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 FAM71E1Q6IPT2 247 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 OGFOD2Q6N063 350 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 PAPD4Q6PIY7 484 aaKnown RBP11.34□□□□□ -0.59
CHKA-203ENST00000525155 GFRALQ6UXV0 394 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 ACAD11Q709F0 780 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 CLNKQ7Z7G1 428 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 ZNF227Q86WZ6 799 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 CHERPQ8IWX8 916 aaKnown RBP11.34□□□□□ -0.59
CHKA-203ENST00000525155 BEST3Q8N1M1 668 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 MORN4Q8NDC4 146 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 MDS2Q8NDY4 140 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 CEP70Q8NHQ1 597 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHKA-203ENST00000525155 STON2Q8WXE9 905 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 KLHL29Q96CT2 875 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 SLCO1B3Q9NPD5 702 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 PNO1Q9NRX1 252 aaKnown RBP11.34□□□□□ -0.59
CHKA-203ENST00000525155 RYDENQ9NUL5 291 aaKnown RBP11.34□□□□□ -0.59
CHKA-203ENST00000525155 ATAD3AQ9NVI7 634 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHKA-203ENST00000525155 ANKRD10Q9NXR5 420 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 TEKT2Q9UIF3 430 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 UTS2RQ9UKP6 389 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 CES1P1Q9UKY3 287 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 ENTPD4Q9Y227 616 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 AKAP9Q99996 3911 aa11.34□□□□□ -0.59
CHKA-203ENST00000525155 SCN3AQ9NY46 2000 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 A0A1B0GUH1 482 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 CDK2AP1O14519 115 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 SDHDO14521 159 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 EDF1O60869 148 aaKnown RBP11.33□□□□□ -0.6
CHKA-203ENST00000525155 SLITRK5O94991 958 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 UNC5CO95185 931 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 RASAL1O95294 804 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 JUNP05412 331 aaKnown RBP11.33□□□□□ -0.6
CHKA-203ENST00000525155 TROVE2P10155 538 aaKnown RBP eCLIP11.33□□□□□ -0.6
CHKA-203ENST00000525155 ADORA2A-AS1P86434 159 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 TUBA3CQ13748 450 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 BTBD16Q32M84 506 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 RNFT1Q5M7Z0 435 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 ABHD17BQ5VST6 288 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 TUBA3EQ6PEY2 450 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 EPGNQ6UW88 154 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 FAM47EQ6ZV65 393 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 LARP4Q71RC2 724 aaKnown RBP eCLIP11.33□□□□□ -0.69e-8■■■□□ 15.8
CHKA-203ENST00000525155 LRRC25Q8N386 305 aaPredicted RBP11.33□□□□□ -0.6
CHKA-203ENST00000525155 LIX1Q8N485 282 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 KIF2BQ8N4N8 673 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 CDC26Q8NHZ8 85 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 MARVELD3Q96A59 401 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 ERP27Q96DN0 273 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 CCDC120Q96HB5 630 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 MAELQ96JY0 434 aaKnown RBP11.33□□□□□ -0.6
CHKA-203ENST00000525155 PPP1R36Q96LQ0 422 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 REEP4Q9H6H4 257 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 MMP25Q9NPA2 562 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 SLC35C2Q9NQQ7 365 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 COPS7AQ9UBW8 275 aa11.33□□□□□ -0.6
CHKA-203ENST00000525155 PPIEQ9UNP9 301 aaKnown RBP11.33□□□□□ -0.6
CHKA-203ENST00000525155 TACC2O95359 2948 aa11.32□□□□□ -0.6
CHKA-203ENST00000525155 PCNX1Q96RV3 2341 aa11.32□□□□□ -0.6
CHKA-203ENST00000525155 ADGRG4Q8IZF6 3080 aa11.32□□□□□ -0.6
CHKA-203ENST00000525155 C17orf105B2RV13 164 aa11.32□□□□□ -0.6
CHKA-203ENST00000525155 POLR3GO15318 223 aaPredicted RBP11.32□□□□□ -0.6
CHKA-203ENST00000525155 DIAPH2O60879 1101 aa11.32□□□□□ -0.6
CHKA-203ENST00000525155 ERAL1O75616 437 aaKnown RBP11.32□□□□□ -0.6
CHKA-203ENST00000525155 NEURL1O76050 574 aa11.32□□□□□ -0.6
CHKA-203ENST00000525155 ATP1B1P05026 303 aa11.32□□□□□ -0.6
CHKA-203ENST00000525155 VIMP08670 466 aaKnown RBP11.32□□□□□ -0.6
CHKA-203ENST00000525155 CPMP14384 443 aa11.32□□□□□ -0.6
CHKA-203ENST00000525155 IDO1P14902 403 aa11.32□□□□□ -0.6
CHKA-203ENST00000525155 POU3F2P20265 443 aaPredicted RBP11.32□□□□□ -0.6
CHKA-203ENST00000525155 EPHA3P29320 983 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms