RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 SHFQ7M4L6 423 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 MCATQ8IVS2 390 aaKnown RBP9.67□□□□□ -0.86
SPIDR-224ENST00000524126 B3GALNT2Q8NCR0 500 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 ARRDC4Q8NCT1 418 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 FAM46DQ8NEK8 389 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 EDARADDQ8WWZ3 215 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 KCNJ9Q92806 393 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 IMP4Q96G21 291 aaKnown RBP9.67□□□□□ -0.86
SPIDR-224ENST00000524126 SMIM14Q96QK8 99 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 NSUN3Q9H649 340 aaKnown RBP9.67□□□□□ -0.86
SPIDR-224ENST00000524126 NMUR1Q9HB89 426 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 GOLGA2P5Q9HBQ8 144 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 FZD3Q9NPG1 666 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 TMEM30AQ9NV96 361 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 ELOVL2Q9NXB9 296 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 KCNK7Q9Y2U2 307 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 DENND4AQ7Z401 1863 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 A0A0G2JPF8 293 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 MANSC4A6NHS7 340 aaPredicted RBP9.67□□□□□ -0.86
SPIDR-224ENST00000524126 HNRNPCL3B7ZW38 293 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 D6RAR5 112 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 GNB5O14775 395 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 HBP1O60381 514 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 ULK1O75385 1050 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 SNAPINO95295 136 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 OTCP00480 354 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 EIF4EP06730 217 aaKnown RBP9.67□□□□□ -0.86
SPIDR-224ENST00000524126 RD3LP0DJH9 198 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 HNRNPCL4P0DMR1 293 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 SPP1P10451 314 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 DRD2P14416 443 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 WARSP23381 471 aaKnown RBP9.67□□□□□ -0.86
SPIDR-224ENST00000524126 HSD17B2P37059 387 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 CCL23P55773 120 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 SP140Q13342 867 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 NCF4Q15080 339 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 SLC6A19Q695T7 634 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 MTFR2Q6P444 385 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 Q6ZTK2 550 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 RAB11FIP2Q7L804 512 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 MARCH9Q86YJ5 346 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 NKAPQ8N5F7 415 aaKnown RBP9.67□□□□□ -0.86
SPIDR-224ENST00000524126 TCEANCQ8N8B7 351 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 RELL2Q8NC24 303 aaPredicted RBP9.67□□□□□ -0.86
SPIDR-224ENST00000524126 OR6S1Q8NH40 331 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 NELL1Q92832 810 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 DOHHQ9BU89 302 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 TMED9Q9BVK6 235 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 TBC1D17Q9HA65 648 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 LRFN2Q9ULH4 789 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 FLVCR2Q9UPI3 526 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 NUBP2Q9Y5Y2 271 aa9.67□□□□□ -0.86
SPIDR-224ENST00000524126 ANKRD36A6QL64 1941 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 ZNF593O00488 134 aaPredicted RBP9.66□□□□□ -0.86
SPIDR-224ENST00000524126 CASC3O15234 703 aaKnown RBP9.66□□□□□ -0.86
SPIDR-224ENST00000524126 NDUFS3O75489 264 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 POP7O75817 140 aaKnown RBP9.66□□□□□ -0.86
SPIDR-224ENST00000524126 CD3GP09693 182 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 C1SP09871 688 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 GJA1P17302 382 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 AHCYP23526 432 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 ITGB8P26012 769 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 CTSCP53634 463 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 HLXQ14774 488 aaPredicted RBP9.66□□□□□ -0.86
SPIDR-224ENST00000524126 KCNA10Q16322 511 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 UAP1L1Q3KQV9 507 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 CRB2Q5IJ48 1285 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 SYNPOQ8N3V7 929 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 IQCF1Q8N6M8 205 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 OR52I1Q8NGK6 324 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 OR4A15Q8NGL6 344 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 PIGKQ92643 395 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 EBPLQ9BY08 206 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 ACPTQ9BZG2 426 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 NMNAT1Q9HAN9 279 aaPredicted RBP9.66□□□□□ -0.86
SPIDR-224ENST00000524126 PRDM9Q9NQV7 894 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 IRAK3Q9Y616 596 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 CD8B2A6NJW9 211 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 HEPACAM2A8MVW5 462 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 GPR31O00270 319 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 YY2O15391 372 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 SDC3O75056 442 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 SOD1P00441 154 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 TFP02787 698 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 MT-ND4P03905 459 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 H2AFB1P0C5Y9 115 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 H2AFB2P0C5Z0 115 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 CD8BP10966 210 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 ELNP15502 786 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 MMP12P39900 470 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 MVDP53602 400 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 ZNF33AQ06730 810 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 IDNKQ5T6J7 187 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 C9orf57Q5W0N0 161 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 BOLLQ8N9W6 283 aaKnown RBP9.66□□□□□ -0.86
SPIDR-224ENST00000524126 CD200R1Q8TD46 325 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 SCARB1Q8WTV0 552 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 SGK3Q96BR1 496 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 ELP4Q96EB1 424 aa9.66□□□□□ -0.86
SPIDR-224ENST00000524126 NARS2Q96I59 477 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms