RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 FSD1LQ9BXM9 530 aa6.09□□□□□ -1.43
SDCBP-210ENST00000522843 FUT8Q9BYC5 575 aa6.09□□□□□ -1.43
SDCBP-210ENST00000522843 TXLNGYQ9BZA5 131 aa6.09□□□□□ -1.43
SDCBP-210ENST00000522843 NLE1Q9NVX2 485 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-210ENST00000522843 GPRC5BQ9NZH0 403 aa6.09□□□□□ -1.43
SDCBP-210ENST00000522843 JKAMPQ9P055 326 aa6.09□□□□□ -1.43
SDCBP-210ENST00000522843 KCMF1Q9P0J7 381 aa6.09□□□□□ -1.43
SDCBP-210ENST00000522843 H2AFY2Q9P0M6 372 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-210ENST00000522843 RSPH14Q9UHP6 348 aa6.09□□□□□ -1.43
SDCBP-210ENST00000522843 ZNF223Q9UK11 482 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-210ENST00000522843 PRKDCP78527 4128 aaKnown RBP6.08□□□□□ -1.44
SDCBP-210ENST00000522843 A0A1W2PRX2 142 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 HSPB2A8KAH6 182 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 PRKNO60260 465 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-210ENST00000522843 ULK1O75385 1050 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 VPS26AO75436 327 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 RDH16O75452 317 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 GOSR1O95249 250 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 RBP3P10745 1247 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 ERGP11308 486 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 PSMA3P25788 255 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 AVPR1BP47901 424 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 KCNJ1P48048 391 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 PTH2RP49190 550 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 AGFG1P52594 562 aaKnown RBP6.08□□□□□ -1.44
SDCBP-210ENST00000522843 OR4D2P58180 307 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 MPP1Q00013 466 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 SLC25A3Q00325 362 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 SORDQ00796 357 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 ACTN3Q08043 901 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-210ENST00000522843 FOXO1Q12778 655 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 SEMA3AQ14563 771 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 TRADDQ15628 312 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 HSPB2Q16082 182 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 XKR6Q5GH73 641 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.08□□□□□ -1.44
SDCBP-210ENST00000522843 SUSD1Q6UWL2 747 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 ZDHHC24Q6UX98 284 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 KIAA0408Q6ZU52 694 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 KLHDC8BQ8IXV7 354 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 KRT222Q8N1A0 295 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 APCDD1LQ8NCL9 501 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 PSD4Q8NDX1 1056 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-210ENST00000522843 SMPDL3BQ92485 455 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 GCDHQ92947 438 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-210ENST00000522843 PIGTQ969N2 578 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 GFM2Q969S9 779 aaKnown RBP6.08□□□□□ -1.44
SDCBP-210ENST00000522843 WDR83Q9BRX9 315 aaKnown RBP6.08□□□□□ -1.44
SDCBP-210ENST00000522843 GBA3Q9H227 469 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 SLC6A15Q9H2J7 730 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 SEMA4BQ9NPR2 832 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-210ENST00000522843 ZNF446Q9NWS9 450 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 OXSMQ9NWU1 459 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 ALKBH4Q9NXW9 302 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 GRHL1Q9NZI5 618 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 ACAD8Q9UKU7 415 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 PKD1L1Q8TDX9 2849 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 KMT2CQ8NEZ4 4911 aaKnown RBP6.08□□□□□ -1.44
SDCBP-210ENST00000522843 HEATR5AQ86XA9 2040 aa6.08□□□□□ -1.44
SDCBP-210ENST00000522843 TENM1Q9UKZ4 2725 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 ATP6AP2A0A1C7CYW4 349 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 CCDC162PA2VCL2 907 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 ZNF860A6NHJ4 632 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 SAGE2PA6NJ88 616 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 DEFB108AA8MXU0 73 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 QSOX1O00391 747 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 ZNF354AO60765 605 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-210ENST00000522843 ITGA10O75578 1167 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 ATP6AP2O75787 350 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 SEC31AO94979 1220 aaKnown RBP6.07□□□□□ -1.44
SDCBP-210ENST00000522843 OR6B1O95007 311 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 KRT14P02533 472 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 RPN2P04844 631 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 OR56A5P0C7T3 313 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 TPH1P17752 444 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 PSMB4P28070 264 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 CMPK1P30085 196 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 TNNT3P45378 269 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-210ENST00000522843 RPL21P46778 160 aaKnown RBP6.07□□□□□ -1.44
SDCBP-210ENST00000522843 MAN2A2P49641 1150 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 GEMP55040 296 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 SESN2P58004 480 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-210ENST00000522843 EIF3EP60228 445 aaKnown RBP6.07□□□□□ -1.44
SDCBP-210ENST00000522843 PLGLB1Q02325 96 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 ACKR1Q16570 336 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 HYAL4Q2M3T9 481 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 P3H1Q32P28 736 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 FAM109AQ8N4B1 249 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 ANKRD53Q8N9V6 530 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 ATG4AQ8WYN0 398 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 RAD51AP1Q96B01 352 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 LRRC45Q96CN5 670 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 HAUS1Q96CS2 278 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 SLC7A6OSQ96CW6 309 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-210ENST00000522843 DACH2Q96NX9 599 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 QKIQ96PU8 341 aaKnown RBP eCLIP6.07□□□□□ -1.44
SDCBP-210ENST00000522843 VAT1Q99536 393 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 CCL19Q99731 98 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 PIGQQ9BRB3 760 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms