RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 TSPAN8P19075 237 aa16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 TLE4Q04727 773 aa16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 CLCQ05315 142 aa16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 SLC48A1Q6P1K1 146 aa16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 LETMD1Q6P1Q0 360 aa16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 TRMT10CQ7L0Y3 403 aaKnown RBP16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 LCA5Q86VQ0 697 aa16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 ZNF615Q8N8J6 731 aa16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 ZNF597Q96LX8 424 aa16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 TREX2Q9BQ50 279 aaPredicted RBP16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 PROK2Q9HC23 129 aa16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 ACKR4Q9NPB9 350 aa16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 NFU1Q9UMS0 254 aa16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 PCDHA9Q9Y5H5 950 aa16.97■□□□□ 0.31
TOP1MT-216ENST00000522121 A0A1B0GTL3 188 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 LRRC3CA6NJW4 275 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 PPP6CO00743 305 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 ERAL1O75616 437 aaKnown RBP16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 SUPT7LO94864 414 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 TOXO94900 526 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 LRATO95237 230 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 KRT6AP02538 564 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 KRT6BP04259 564 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 SBK3P0C264 359 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 CT62P0C5K7 136 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 GLI4P10075 376 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 KRT15P19012 456 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 GDF1P27539 372 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 HSD17B3P37058 310 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 ZFP36L2P47974 494 aaKnown RBP16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 KRT6CP48668 564 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 FBXW4P57775 412 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 C1orf185Q5T7R7 199 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 TMEM64Q6YI46 380 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 TIFABQ6ZNK6 161 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 IFT20Q8IY31 132 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 VWA5B2Q8N398 1253 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 TMEM151AQ8N4L1 468 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 CEP112Q8N8E3 955 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 C17orf47Q8NEP4 570 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 NEIL3Q8TAT5 605 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 SECISBP2Q96T21 854 aaKnown RBP16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 FAIM2Q9BWQ8 316 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 MCCC2Q9HCC0 563 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 CFL2Q9Y281 166 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 FAM215AQ9Y5M1 114 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 PKDREJQ9NTG1 2253 aa16.96■□□□□ 0.31
TOP1MT-216ENST00000522121 TRIM3O75382 744 aaPredicted RBP16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 OR4F21O95013 312 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 SNX4O95219 450 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 HSD3B1P14060 373 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 CSNK2A2P19784 350 aaPredicted RBP16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 HSD3B2P26439 372 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 MSX1P28360 303 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 TRA2BP62995 288 aaKnown RBP16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 TFF3Q07654 80 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 GALNT1Q10472 559 aaPredicted RBP16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 RASA2Q15283 850 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 RTL6Q6ICC9 239 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 PACS2Q86VP3 889 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 CLYBLQ8N0X4 340 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 CNPY4Q8N129 248 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 CDYL2Q8N8U2 506 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 KIF18AQ8NI77 898 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 SPPL2AQ8TCT8 520 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 ADIPOR1Q96A54 375 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 TM4SF18Q96CE8 201 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 KLHL29Q96CT2 875 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 BRINP2Q9C0B6 783 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 SLC6A15Q9H2J7 730 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 SLC24A3Q9HC58 644 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 NPDC1Q9NQX5 325 aaPredicted RBP16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 SPRR3Q9UBC9 169 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 VPS29Q9UBQ0 182 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 BCAP29Q9UHQ4 241 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 CES1P1Q9UKY3 287 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 STK38LQ9Y2H1 464 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 PCDHGB3Q9Y5G1 929 aa16.95■□□□□ 0.3
TOP1MT-216ENST00000522121 CACNA1CQ13936 2221 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 MANBAO00462 879 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 CDH16O75309 829 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 ATP1B1P05026 303 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 IGFBP2P18065 325 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 ENDOUP21128 410 aaKnown RBP16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 GPX3P22352 226 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 FEN1P39748 380 aaKnown RBP16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 MASP1P48740 699 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 TRPC1P48995 793 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 ALDH9A1P49189 494 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 MAP4K2Q12851 820 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 PRICKLE4Q2TBC4 344 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 ZNF678Q5SXM1 525 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 C1orf52Q8N6N3 182 aaKnown RBP16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 RILPQ96NA2 401 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 ANGPTL4Q9BY76 406 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 TMEM216Q9P0N5 145 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 ZNF780BQ9Y6R6 833 aa16.94■□□□□ 0.3
TOP1MT-216ENST00000522121 ADGRG4Q8IZF6 3080 aa16.93■□□□□ 0.3
TOP1MT-216ENST00000522121 ZNF407Q9C0G0 2248 aa16.93■□□□□ 0.3
TOP1MT-216ENST00000522121 C15orf38-AP3S2A0A0A6YYH1 394 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms