RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-233	ENST00000522052	POLR1E	Q9GZS1	481 aa	Known RBP	4.28	□□□□□ -1.72
CTNNA1-233	ENST00000522052	KCNK13	Q9HB14	408 aa		4.28	□□□□□ -1.72
CTNNA1-233	ENST00000522052	NMUR1	Q9HB89	426 aa		4.28	□□□□□ -1.72
CTNNA1-233	ENST00000522052	TUBGCP4	Q9UGJ1	667 aa		4.28	□□□□□ -1.72
CTNNA1-233	ENST00000522052	ATP6V1H	Q9UI12	483 aa		4.28	□□□□□ -1.72
CTNNA1-233	ENST00000522052	TCF19	Q9Y242	345 aa		4.28	□□□□□ -1.72
CTNNA1-233	ENST00000522052	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.28	□□□□□ -1.72
CTNNA1-233	ENST00000522052	CSNK1G3	Q9Y6M4	447 aa		4.28	□□□□□ -1.72
CTNNA1-233	ENST00000522052	KDR	P35968	1356 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	TMCO5B	A8MYB1	307 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	CFLAR	O15519	480 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	RIPK2	O43353	540 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	GSTA1	P08263	222 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	ANOS1	P23352	680 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	OPRL1	P41146	370 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	SLC1A6	P48664	564 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	CRYBA2	P53672	197 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	NAPA	P54920	295 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	ACTR1A	P61163	376 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	PPIA	P62937	165 aa	Known RBP	4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	DHODH	Q02127	395 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	TRIP10	Q15642	601 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	HLA-B	Q31612	363 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	ZNF699	Q32M78	642 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	ZNF311	Q5JNZ3	666 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	RHBDD2	Q6NTF9	364 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	SLC39A4	Q6P5W5	647 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	CBWD2	Q8IUF1	395 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	TBC1D10C	Q8IV04	446 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	ZDHHC21	Q8IVQ6	265 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	PYROXD2	Q8N2H3	581 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	ARFGAP2	Q8N6H7	521 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	ICA1L	Q8NDH6	482 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	DDHD1	Q8NEL9	900 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	SLCO2A1	Q92959	643 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	VPS35	Q96QK1	796 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	F2RL3	Q96RI0	385 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	NODAL	Q96S42	347 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	TMEM117	Q9H0C3	514 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	PLEKHA3	Q9HB20	300 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	ATAD3A	Q9NVI7	634 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	GDAP2	Q9NXN4	497 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	NLGN3	Q9NZ94	848 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	PARD3	Q8TEW0	1356 aa		4.27	□□□□□ -1.73
CTNNA1-233	ENST00000522052	TSPOAP1	O95153	1857 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	HHLA1	C9JL84	531 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052		K7EQD1	137 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	TBX19	O60806	448 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	GOT2	P00505	430 aa	Known RBP	4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	ANXA4	P09525	319 aa	Predicted RBP	4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	OTX2	P32243	289 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	RPL9	P32969	192 aa	Known RBP	4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	MMP12	P39900	470 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	ID1	P41134	155 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	ERVK-16	P61578	105 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	SNRPD1	P62314	119 aa	Known RBP	4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	GNB1	P62873	340 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	FAM189A2	Q15884	450 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	TPD52L1	Q16890	204 aa	Predicted RBP	4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	DCAF4L1	Q3SXM0	396 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	POM121L1P	Q3SYA9	428 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	CEP55	Q53EZ4	464 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	ASPHD2	Q6ICH7	369 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	PWWP2B	Q6NUJ5	590 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	CBLN3	Q6UW01	205 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052		Q6ZRP5	223 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	P4HA3	Q7Z4N8	544 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	LHFPL4	Q7Z7J7	247 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	CHDH	Q8NE62	594 aa	Predicted RBP	4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	OR52M1	Q8NGK5	317 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	OR10G7	Q8NGN6	311 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	FBXO25	Q8TCJ0	367 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	C4orf36	Q96KX1	117 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	VSTM2L	Q96N03	204 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	TESK2	Q96S53	571 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	KAT8	Q9H7Z6	458 aa	Known RBP	4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	MED20	Q9H944	212 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	CHRNA9	Q9UGM1	479 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	FZR1	Q9UM11	496 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	RABL2B	Q9UNT1	228 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	B9D1	Q9UPM9	204 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	MRPS7	Q9Y2R9	242 aa	Known RBP	4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	RNF115	Q9Y4L5	304 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	DDX49	Q9Y6V7	483 aa	Known RBP	4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	YEATS2	Q9ULM3	1422 aa		4.26	□□□□□ -1.73
CTNNA1-233	ENST00000522052	AFF2	P51816	1311 aa		4.25	□□□□□ -1.73
CTNNA1-233	ENST00000522052	IGHV3-20	A0A0C4DH32	117 aa		4.25	□□□□□ -1.73
CTNNA1-233	ENST00000522052	MEIOC	A2RUB1	952 aa		4.25	□□□□□ -1.73
CTNNA1-233	ENST00000522052	WASH3P	C4AMC7	463 aa		4.25	□□□□□ -1.73
CTNNA1-233	ENST00000522052	NEDD8-MDP1	E9PL57	170 aa		4.25	□□□□□ -1.73
CTNNA1-233	ENST00000522052		H3BTX0	84 aa		4.25	□□□□□ -1.73
CTNNA1-233	ENST00000522052	SDHD	O14521	159 aa		4.25	□□□□□ -1.73
CTNNA1-233	ENST00000522052	XPO1	O14980	1071 aa	Known RBP	4.25	□□□□□ -1.73
CTNNA1-233	ENST00000522052	MAGEB3	O15480	346 aa		4.25	□□□□□ -1.73
CTNNA1-233	ENST00000522052	HMMR	O75330	724 aa		4.25	□□□□□ -1.73

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