RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 HMBSP08397 361 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 EDNRAP25101 427 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 GIFP27352 417 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 TRIM23P36406 574 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 SOX3P41225 446 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 PTGFRP43088 359 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 ACADSBP45954 432 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 LEPRP48357 1165 aaKnown RBP3.48□□□□□ -1.85
SQLE-204ENST00000520493 SLC1A6P48664 564 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 NAPAP54920 295 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 UBE2HP62256 183 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 MRPL28Q13084 256 aaKnown RBP3.48□□□□□ -1.85
SQLE-204ENST00000520493 DDX39BQ13838 428 aaKnown RBP3.48□□□□□ -1.85
SQLE-204ENST00000520493 IDI1Q13907 227 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 SLC1A5Q15758 541 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 USH1GQ495M9 461 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 ACSF3Q4G176 576 aaPredicted RBP3.48□□□□□ -1.85
SQLE-204ENST00000520493 LIPKQ5VXJ0 399 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 LIPJQ5W064 366 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 CAPN13Q6MZZ7 669 aaPredicted RBP3.48□□□□□ -1.85
SQLE-204ENST00000520493 SLC39A4Q6P5W5 647 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 FIP1L1Q6UN15 594 aaKnown RBP3.48□□□□□ -1.85
SQLE-204ENST00000520493 CBLN3Q6UW01 205 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 CWC27Q6UX04 472 aaKnown RBP3.48□□□□□ -1.85
SQLE-204ENST00000520493 ZYG11AQ6WRX3 759 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 ZNF497Q6ZNH5 498 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 GOLGA7Q7Z5G4 137 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 CBWD2Q8IUF1 395 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 LACC1Q8IV20 430 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 ZNF843Q8N446 348 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 MRGPRDQ8TDS7 321 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 TMEM37Q8WXS4 190 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 MCHR2Q969V1 340 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 SENP8Q96LD8 212 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 CXorf58Q96LI9 332 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 VPS35Q96QK1 796 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 PSKH2Q96QS6 385 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 ALG12Q9BV10 488 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 RAB11FIP5Q9BXF6 653 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.48□□□□□ -1.85
SQLE-204ENST00000520493 P2RX2Q9UBL9 471 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 POMT2Q9UKY4 750 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 ATG4BQ9Y4P1 393 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 OR1A2Q9Y585 309 aa3.48□□□□□ -1.85
SQLE-204ENST00000520493 MBLAC1A4D2B0 266 aaPredicted RBP3.47□□□□□ -1.85
SQLE-204ENST00000520493 C15orf61A6NNL5 157 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 SRRM4A7MD48 611 aaKnown RBP3.47□□□□□ -1.85
SQLE-204ENST00000520493 LMO7DNF2Z398 122 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 H0Y8G0 127 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 SGK1O00141 431 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 MTRF1O75570 445 aaKnown RBP3.47□□□□□ -1.85
SQLE-204ENST00000520493 GNB3P16520 340 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 C4BPBP20851 252 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 ATP6V1C1P21283 382 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 GPX3P22352 226 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 CALB2P22676 271 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 GLRA1P23415 457 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 CHI3L1P36222 383 aaPredicted RBP3.47□□□□□ -1.85
SQLE-204ENST00000520493 LIMK2P53671 638 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 CCNA1P78396 465 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 BTG3Q14201 252 aaPredicted RBP3.47□□□□□ -1.85
SQLE-204ENST00000520493 RFTN1Q14699 578 aaPredicted RBP3.47□□□□□ -1.85
SQLE-204ENST00000520493 PDK3Q15120 406 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 C3AR1Q16581 482 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 LRIT3Q3SXY7 679 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 SPANXN4Q5MJ08 99 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 FAM53AQ6NSI3 398 aaPredicted RBP3.47□□□□□ -1.85
SQLE-204ENST00000520493 Q6ZVQ6 151 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 CDH26Q8IXH8 852 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 TMEM178AQ8NBL3 297 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 CCDC197Q8NCU1 140 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 OR6S1Q8NH40 331 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 TCP11Q8WWU5 503 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 AZIN2Q96A70 460 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 C4orf36Q96KX1 117 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 ART5Q96L15 291 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 CNOT6LQ96LI5 555 aaKnown RBP3.47□□□□□ -1.85
SQLE-204ENST00000520493 NEDD4LQ96PU5 975 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 SECISBP2Q96T21 854 aaKnown RBP3.47□□□□□ -1.85
SQLE-204ENST00000520493 JPH2Q9BR39 696 aaPredicted RBP3.47□□□□□ -1.85
SQLE-204ENST00000520493 DCTN5Q9BTE1 182 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 WWP1Q9H0M0 922 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 VCX2Q9H322 139 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 RPAP3Q9H6T3 665 aaPredicted RBP3.47□□□□□ -1.85
SQLE-204ENST00000520493 TECRQ9NZ01 308 aaKnown RBP3.47□□□□□ -1.85
SQLE-204ENST00000520493 KLHL8Q9P2G9 620 aaPredicted RBP3.47□□□□□ -1.85
SQLE-204ENST00000520493 MIOXQ9UGB7 285 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 B9D1Q9UPM9 204 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 WIPI2Q9Y4P8 454 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 NSD2O96028 1365 aa3.47□□□□□ -1.85
SQLE-204ENST00000520493 NEDD4P46934 1319 aa3.46□□□□□ -1.85
SQLE-204ENST00000520493 NR5A2O00482 541 aa3.46□□□□□ -1.86
SQLE-204ENST00000520493 ARHGEF9O43307 516 aa3.46□□□□□ -1.86
SQLE-204ENST00000520493 SURF6O75683 361 aaKnown RBP3.46□□□□□ -1.86
SQLE-204ENST00000520493 ANGPTL1O95841 491 aa3.46□□□□□ -1.86
SQLE-204ENST00000520493 TOP1P11387 765 aaKnown RBP3.46□□□□□ -1.86
SQLE-204ENST00000520493 CCNCP24863 283 aa3.46□□□□□ -1.86
SQLE-204ENST00000520493 PPP2R1AP30153 589 aa3.46□□□□□ -1.86
SQLE-204ENST00000520493 GDI1P31150 447 aa3.46□□□□□ -1.86
SQLE-204ENST00000520493 MAP2K2P36507 400 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms