RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 DYNLL1P63167 89 aaKnown RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 CTAG1AP78358 180 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 UBXN1Q04323 297 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 LRRC63Q05C16 580 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 KLRC3Q07444 240 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 IL10RBQ08334 325 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 CDH18Q13634 790 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 TAZQ16635 292 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 HSP90AA4PQ58FG1 418 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 FAM166AQ6J272 317 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 KLHL10Q6JEL2 608 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 TTC27Q6P3X3 843 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 RGS9BPQ6ZS82 235 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 SLC24A5Q71RS6 500 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 CPEB2Q7Z5Q1 589 aaKnown RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 KRT77Q7Z794 578 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 GLRX5Q86SX6 157 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 TMEM110Q86TL2 294 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 ECHDC2Q86YB7 292 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 LMNTD2Q8IXW0 634 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZC3H3Q8IXZ2 948 aaKnown RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZBED8Q8IZ13 594 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNF444Q8N0Y2 327 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 KIF2BQ8N4N8 673 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 NKAIN3Q8N8D7 197 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 OR4D10Q8NGI6 311 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 FNDC8Q8TC99 324 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 ACTRT1Q8TDG2 376 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 CHURC1Q8WUH1 139 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 NAT14Q8WUY8 206 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 MAGOHBQ96A72 148 aaKnown RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 MOCOSQ96EN8 888 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 MS4A14Q96JA4 679 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 NSMCE3Q96MG7 304 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 CATSPER2Q96P56 530 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 TUBGCP2Q9BSJ2 902 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 SYT11Q9BT88 431 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 DGCR6LQ9BY27 220 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 TRIM9Q9C026 710 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 WWTR1Q9GZV5 400 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 GFRA4Q9GZZ7 299 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 GLT8D2Q9H1C3 349 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 CARD9Q9H257 536 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 VCXQ9H320 206 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 VCX3BQ9H321 246 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 DCLRE1BQ9H816 532 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 MTHFD2LQ9H903 347 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 MED20Q9H944 212 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 NHEJ1Q9H9Q4 299 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 LMAN1LQ9HAT1 526 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 C6orf50Q9HD87 102 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 VCX3AQ9NNX9 186 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 EXOC1Q9NV70 894 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 ETNK2Q9NVF9 386 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 TBC1D13Q9NVG8 400 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNHIT6Q9NWK9 470 aaKnown RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 EURLQ9NYK6 297 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 AIPL1Q9NZN9 384 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 FBXL5Q9UKA1 691 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 FBXL4Q9UKA2 621 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 CCPG1Q9ULG6 757 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 AGTPBP1Q9UPW5 1226 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 ARL2BPQ9Y2Y0 163 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 ANGPTL3Q9Y5C1 460 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 COL1A1P02452 1464 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 NHSL1Q5SYE7 1610 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 NUP98P52948 1817 aa2.82□□□□□ -1.96
HMGB1P41-201ENST00000520234 PTPRFP10586 1907 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 KIF26BQ2KJY2 2108 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 TRAV18A0A075B6X5 111 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 IGKV3D-15A0A087WSY6 115 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 TRBV4-1A0A0J9YWV2 114 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 SMIM31A0A1B0GVY4 71 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 A0A1W2PR80 420 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 SMCO2A6NFE2 343 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 FAM86B1E9PN63 330 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 NPIPA3F8WFD2 350 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 NMT2O60551 498 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 FCGR3BO75015 233 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 PRDM1O75626 825 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 MOCS2O96007 188 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 AGTP01019 485 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 PLEKP08567 350 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 FAM86B2P0C5J1 330 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 VDRP11473 427 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 DPEP1P16444 411 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 HOXD10P28358 340 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 CASP1P29466 404 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 HPDP32754 393 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 MMP12P39900 470 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 VHLP40337 213 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 OPRL1P41146 370 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 PSMD7P51665 324 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 XGP55808 180 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 SH3BGRP55822 239 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 STX17P56962 302 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 DCDC1P59894 354 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 PTENP60484 403 aa2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 RPL26P61254 145 aaKnown RBP2.81□□□□□ -1.96
HMGB1P41-201ENST00000520234 RELAQ04206 551 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms