RNA–Protein interactions for RNA: ENST00000519503.5

CHMP7-205, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-205ENST00000519503 ZNF597Q96LX8 424 aa19.93■□□□□ 0.78
CHMP7-205ENST00000519503 SECISBP2Q96T21 854 aaKnown RBP19.93■□□□□ 0.78
CHMP7-205ENST00000519503 TTYH2Q9BSA4 534 aa19.93■□□□□ 0.78
CHMP7-205ENST00000519503 OR10A5Q9H207 317 aa19.93■□□□□ 0.78
CHMP7-205ENST00000519503 PROK2Q9HC23 129 aa19.93■□□□□ 0.78
CHMP7-205ENST00000519503 ACKR4Q9NPB9 350 aa19.93■□□□□ 0.78
CHMP7-205ENST00000519503 CNOT11Q9UKZ1 510 aaKnown RBP19.93■□□□□ 0.78
CHMP7-205ENST00000519503 ARHGAP21Q5T5U3 1957 aa19.93■□□□□ 0.78
CHMP7-205ENST00000519503 LRRC3CA6NJW4 275 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 FAM90A27PA6NNH2 459 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 PDYNP01213 254 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 SBK3P0C264 359 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 GABRA1P14867 456 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 IGFBP2P18065 325 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 CAPN3P20807 821 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 RPP38P78345 283 aaKnown RBP19.92■□□□□ 0.78
CHMP7-205ENST00000519503 SLC48A1Q6P1K1 146 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 TRMT10CQ7L0Y3 403 aaKnown RBP19.92■□□□□ 0.78
CHMP7-205ENST00000519503 CCDC71Q8IV32 467 aaPredicted RBP19.92■□□□□ 0.78
CHMP7-205ENST00000519503 ZNF615Q8N8J6 731 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 DIO2Q92813 273 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 FARSBQ9NSD9 589 aaKnown RBP19.92■□□□□ 0.78
CHMP7-205ENST00000519503 PSME2Q9UL46 239 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 CFL2Q9Y281 166 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 PCDHGB3Q9Y5G1 929 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 PCDHA9Q9Y5H5 950 aa19.92■□□□□ 0.78
CHMP7-205ENST00000519503 A0A1W2PS29 197 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 TOXO94900 526 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 CT62P0C5K7 136 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 GLI4P10075 376 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 HSD3B1P14060 373 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 NT5EP21589 574 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 HSD3B2P26439 372 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 MSX1P28360 303 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 DEKP35659 375 aaKnown RBP19.91■□□□□ 0.78
CHMP7-205ENST00000519503 CDH13P55290 713 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 TFF3Q07654 80 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 GALNT1Q10472 559 aaPredicted RBP19.91■□□□□ 0.78
CHMP7-205ENST00000519503 RASA2Q15283 850 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 TEX35Q5T0J7 233 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 TMEM198Q66K66 360 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 RPS27LQ71UM5 84 aaKnown RBP19.91■□□□□ 0.78
CHMP7-205ENST00000519503 IFT20Q8IY31 132 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 VWA5B2Q8N398 1253 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 LIX1Q8N485 282 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 OR10Q1Q8NGQ4 319 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 JSRP1Q96MG2 331 aaPredicted RBP19.91■□□□□ 0.78
CHMP7-205ENST00000519503 FAIM2Q9BWQ8 316 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 MCCC2Q9HCC0 563 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 NPDC1Q9NQX5 325 aaPredicted RBP19.91■□□□□ 0.78
CHMP7-205ENST00000519503 NFU1Q9UMS0 254 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 FAM215AQ9Y5M1 114 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 NPFFR2Q9Y5X5 522 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 FREM3P0C091 2139 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 CCDC168Q8NDH2 2452 aa19.91■□□□□ 0.78
CHMP7-205ENST00000519503 A0A1B0GTL3 188 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 NKX2-6A6NCS4 301 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 TRIM3O75382 744 aaPredicted RBP19.9■□□□□ 0.78
CHMP7-205ENST00000519503 SNX4O95219 450 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 KRT6AP02538 564 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 KRT6BP04259 564 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 ATP1B1P05026 303 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 RFPL3SP0C7P2 107 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 CSNK2A2P19784 350 aaPredicted RBP19.9■□□□□ 0.78
CHMP7-205ENST00000519503 HSD17B3P37058 310 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 KRT6CP48668 564 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 TRA2BP62995 288 aaKnown RBP19.9■□□□□ 0.78
CHMP7-205ENST00000519503 TLE4Q04727 773 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 CLCQ05315 142 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 C1orf185Q5T7R7 199 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 CEP112Q8N8E3 955 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 KIF18AQ8NI77 898 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 NEIL3Q8TAT5 605 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 ADIPOR1Q96A54 375 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 ZNF382Q96SR6 550 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 SLC24A3Q9HC58 644 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 SPRR3Q9UBC9 169 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 TNFRSF10DQ9UBN6 386 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 VPS29Q9UBQ0 182 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 CES1P1Q9UKY3 287 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 STK38LQ9Y2H1 464 aa19.9■□□□□ 0.78
CHMP7-205ENST00000519503 PPP6CO00743 305 aa19.89■□□□□ 0.77
CHMP7-205ENST00000519503 CDH16O75309 829 aa19.89■□□□□ 0.77
CHMP7-205ENST00000519503 TSPAN8P19075 237 aa19.89■□□□□ 0.77
CHMP7-205ENST00000519503 ENDOUP21128 410 aaKnown RBP19.89■□□□□ 0.77
CHMP7-205ENST00000519503 GDF1P27539 372 aa19.89■□□□□ 0.77
CHMP7-205ENST00000519503 ZFP36L2P47974 494 aaKnown RBP19.89■□□□□ 0.77
CHMP7-205ENST00000519503 FBXW4P57775 412 aa19.89■□□□□ 0.77
CHMP7-205ENST00000519503 MAP4K2Q12851 820 aa19.89■□□□□ 0.77
CHMP7-205ENST00000519503 CSTF3Q12996 717 aaKnown RBP19.89■□□□□ 0.77
CHMP7-205ENST00000519503 ZNF678Q5SXM1 525 aa19.89■□□□□ 0.77
CHMP7-205ENST00000519503 RTL6Q6ICC9 239 aa19.89■□□□□ 0.77
CHMP7-205ENST00000519503 PACS2Q86VP3 889 aa19.89■□□□□ 0.77
CHMP7-205ENST00000519503 SPPL2AQ8TCT8 520 aa19.89■□□□□ 0.77
CHMP7-205ENST00000519503 UCK2Q9BZX2 261 aa19.89■□□□□ 0.77
CHMP7-205ENST00000519503 FETUBQ9UGM5 382 aa19.89■□□□□ 0.77
CHMP7-205ENST00000519503 ZNF225Q9UK10 706 aa19.89■□□□□ 0.77
CHMP7-205ENST00000519503 TEP1Q99973 2627 aaKnown RBP19.88■□□□□ 0.77
CHMP7-205ENST00000519503 RIPK2O43353 540 aa19.88■□□□□ 0.77
CHMP7-205ENST00000519503 ERAL1O75616 437 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms