RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 APOL4Q9BPW4 351 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 MAPKAP1Q9BPZ7 522 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 TREX2Q9BQ50 279 aaPredicted RBP7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 ACTRT3Q9BYD9 372 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 OR51I1Q9H343 314 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 PAK1IP1Q9NWT1 392 aaPredicted RBP7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 RSL24D1Q9UHA3 163 aaKnown RBP7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 A4GNTQ9UNA3 340 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 C19orf53Q9UNZ5 99 aaPredicted RBP7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 SAMHD1Q9Y3Z3 626 aaKnown RBP7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 CSNK1G3Q9Y6M4 447 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 THADAQ6YHU6 1953 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 ADAMTS9Q9P2N4 1935 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 TMEM247A6NEH6 219 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 THEGLP0DJG4 465 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 TDGF1P13385 188 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 POLR2IP36954 125 aaKnown RBP7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 CAPZBP47756 277 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 NXPH1P58417 271 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 SMIM11AP58511 58 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 PRR5P85299 388 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 RAPSNQ13702 412 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 RUNX2Q13950 521 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 KRT33BQ14525 404 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 NPTX1Q15818 432 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 GARNL3Q5VVW2 1013 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 UBE2UQ5VVX9 321 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 C12orf73Q69YU5 71 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 SLC36A4Q6YBV0 504 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 CA13Q8N1Q1 262 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 LRRC25Q8N386 305 aaPredicted RBP7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 HMGB4Q8WW32 186 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 PPP1R14BQ96C90 147 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 GAS2L1Q99501 681 aaPredicted RBP7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 DUSP15Q9H1R2 295 aaPredicted RBP7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 MAN2C1Q9NTJ4 1040 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 PDP1Q9P0J1 537 aaPredicted RBP7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 MAP4K5Q9Y4K4 846 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 SNX11Q9Y5W9 270 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 V9GYQ6 96 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 SZT2Q5T011 3432 aa7.54□□□□□ -1.2
ARFGEF1-204ENST00000518290 H3BQ06 376 aaPredicted RBP7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 hCG_2039718K7EN88 272 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 K7ESF4 209 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 FMO6PO60774 539 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 AK1P00568 194 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 IFNW1P05000 195 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 CHRM4P08173 479 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 MATN1P21941 496 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 SLC5A2P31639 672 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 BUD31P41223 144 aaPredicted RBP7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 PRIM2P49643 509 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 NCBP2P52298 156 aaKnown RBP eCLIP7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 CRISP3P54108 245 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 RAB38P57729 211 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 SNRPGP62308 76 aaKnown RBP7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 SNRPNP63162 240 aaKnown RBP7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 DUSP7Q16829 419 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 ENTPD8Q5MY95 495 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 OTUD3Q5T2D3 398 aaPredicted RBP7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 ANKRD34AQ69YU3 496 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 LAIR1Q6GTX8 287 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 TCTN3Q6NUS6 607 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 MFSD12Q6NUT3 480 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 OOSP2Q86WS3 158 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 OFCC1Q8IZS5 231 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 ZNF786Q8N393 782 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 ZNF578Q96N58 590 aaPredicted RBP7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 LMF2Q9BU23 707 aaKnown RBP7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 ZNF350Q9GZX5 532 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 SLC38A1Q9H2H9 487 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 CAAP1Q9H8G2 361 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 MGAT4BQ9UQ53 548 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 HCN4Q9Y3Q4 1203 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 MYOCOSA0A1B0GUC4 107 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 SH3D21A4FU49 640 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 OR6C74A6NCV1 312 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 TNFRSF11BO00300 401 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 GNGT2O14610 69 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 KLF4O43474 513 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 HS6ST1O60243 411 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 SRPX2O60687 465 aaPredicted RBP7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 SERPINB7O75635 380 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 ELAVL4P26378 380 aaKnown RBP7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 ELK4P28324 431 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 RAB39AQ14964 217 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 NDUFA9Q16795 377 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 SYT6Q5T7P8 510 aaPredicted RBP7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 C18orf63Q68DL7 685 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 PRSS48Q7RTY5 328 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 ENTHD1Q8IYW4 607 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 TTC29Q8NA56 475 aaPredicted RBP7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 MORN4Q8NDC4 146 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 TSTD1Q8NFU3 115 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 OR4D11Q8NGI4 311 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 OR5AK3PQ8NH89 298 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 RHOXF1Q8NHV9 184 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 ZDHHC1Q8WTX9 485 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 GAB3Q8WWW8 586 aa7.53□□□□□ -1.2
ARFGEF1-204ENST00000518290 ISOC1Q96CN7 298 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms