RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 CLEC5AQ9NY25 188 aa2.4□□□□□ -2.03
SKP1-203ENST00000517625 EMCNQ9ULC0 261 aa2.4□□□□□ -2.03
SKP1-203ENST00000517625 ZNF490Q9ULM2 529 aaPredicted RBP2.4□□□□□ -2.03
SKP1-203ENST00000517625 SLC6A5Q9Y345 797 aa2.4□□□□□ -2.03
SKP1-203ENST00000517625 FBXO7Q9Y3I1 522 aa2.4□□□□□ -2.03
SKP1-203ENST00000517625 IGHV3OR16-12A0A075B7B8 117 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 RNF103-CHMP3A0A140T963 221 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 TEX48A0A1B0GUV7 120 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 RPL37AP8A6NKH3 93 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 CYB561D2O14569 222 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 GPRIN2O60269 458 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 LRP3O75074 770 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 BCAS2O75934 225 aaPredicted RBP2.39□□□□□ -2.03
SKP1-203ENST00000517625 KBTBD11O94819 623 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 REC8O95072 547 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 ALPPP05187 535 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 MELTFP08582 738 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 CCDC192P0DO97 292 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 ALPPL2P10696 532 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 CAPN2P17655 700 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 ATP6V1E1P36543 226 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 ID1P41134 155 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 BRCC3P46736 316 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 TAF6P49848 677 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 TKTL1P51854 596 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 SLC7A2P52569 658 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 ZFP36L1Q07352 338 aaKnown RBP2.39□□□□□ -2.03
SKP1-203ENST00000517625 C17orf58Q2M2W7 97 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 TMEM44Q2T9K0 475 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 HKDC1Q2TB90 917 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 ACSF3Q4G176 576 aaPredicted RBP2.39□□□□□ -2.03
SKP1-203ENST00000517625 TAF3Q5VWG9 929 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 IL23RQ5VWK5 629 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 RFWD3Q6PCD5 774 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 ATRAIDQ6UW56 229 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 FAM159AQ6UWV7 190 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 MFSD7Q6UXD7 560 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 TIPARPQ7Z3E1 657 aaKnown RBP2.39□□□□□ -2.03
SKP1-203ENST00000517625 TAF8Q7Z7C8 310 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 YRDCQ86U90 279 aaKnown RBP2.39□□□□□ -2.03
SKP1-203ENST00000517625 SERINC5Q86VE9 423 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 CCDC71Q8IV32 467 aaPredicted RBP2.39□□□□□ -2.03
SKP1-203ENST00000517625 HDDC3Q8N4P3 179 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 MRPL43Q8N983 215 aaKnown RBP2.39□□□□□ -2.03
SKP1-203ENST00000517625 TMEM37Q8WXS4 190 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 TMEM45BQ96B21 275 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 NTNG2Q96CW9 530 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 C14orf79Q96F83 325 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 NSMCE2Q96MF7 247 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 ACCSQ96QU6 501 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 TSPAN18Q96SJ8 248 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 JPH2Q9BR39 696 aaPredicted RBP2.39□□□□□ -2.03
SKP1-203ENST00000517625 TTYH2Q9BSA4 534 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 ZNF577Q9BSK1 485 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 WRAP53Q9BUR4 548 aaKnown RBP2.39□□□□□ -2.03
SKP1-203ENST00000517625 GPR174Q9BXC1 333 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 NACA2Q9H009 215 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 ZBP1Q9H171 429 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 SYTL2Q9HCH5 934 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 STARD5Q9NSY2 213 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 FAM212BQ9NTI7 297 aaPredicted RBP2.39□□□□□ -2.03
SKP1-203ENST00000517625 COPS7AQ9UBW8 275 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 MLXQ9UH92 298 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 FAM153AQ9UHL3 310 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 DNPEPQ9ULA0 475 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 SLC9A8Q9Y2E8 581 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 STRAPQ9Y3F4 350 aaKnown RBP2.39□□□□□ -2.03
SKP1-203ENST00000517625 PTPRUQ92729 1446 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 SYNJ2O15056 1496 aa2.39□□□□□ -2.03
SKP1-203ENST00000517625 NPC1L1Q9UHC9 1359 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 CFAP73A6NFT4 308 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 CCDC69A6NI79 296 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 ZNF487B1APH4 448 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 E9PAM4 449 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 GOT2P00505 430 aaKnown RBP2.38□□□□□ -2.03
SKP1-203ENST00000517625 FAM200BP0CF97 657 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 GATA2P23769 480 aaPredicted RBP2.38□□□□□ -2.03
SKP1-203ENST00000517625 IGFBP5P24593 272 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 TMOD1P28289 359 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 MAT2AP31153 395 aaKnown RBP2.38□□□□□ -2.03
SKP1-203ENST00000517625 SFNP31947 248 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 MFAP2P55001 183 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 DSCR10P59022 87 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 RPS4XP62701 263 aaKnown RBP2.38□□□□□ -2.03
SKP1-203ENST00000517625 IL9RQ01113 521 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 WASHC5Q12768 1159 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 SNX1Q13596 522 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 CNPY1Q3B7I2 92 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 CCDC40Q4G0X9 1142 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 C14orf28Q4W4Y0 310 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 NHLRC3Q5JS37 347 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 SPINK14Q6IE38 97 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 TATDN1Q6P1N9 297 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 DPY19L2P2Q6ZN68 376 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 Q6ZR54 194 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 GOLGA7Q7Z5G4 137 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 ADCK1Q86TW2 530 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 PYROXD2Q8N2H3 581 aa2.38□□□□□ -2.03
SKP1-203ENST00000517625 KDM8Q8N371 416 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms