RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 FUT7Q11130 342 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 MPEG1Q2M385 716 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 BICRALQ6AI39 1079 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 ZNF787Q6DD87 383 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 EMBQ6PCB8 327 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 FAM47EQ6ZV65 393 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 MAMDC2Q7Z304 686 aaPredicted RBP10.6□□□□□ -0.71
VCAN-212ENST00000515397 GHDCQ8N2G8 530 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 C16orf52Q8NHV5 167 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 NUBPLQ8TB37 319 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 RDH11Q8TC12 318 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 AGR3Q8TD06 166 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 TCP10LQ8TDR4 215 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 CAVIN3Q969G5 261 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 RELTQ969Z4 430 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 CCDC120Q96HB5 630 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 APOPT1Q96IL0 206 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 MAGED4Q96JG8 741 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 JSRP1Q96MG2 331 aaPredicted RBP10.6□□□□□ -0.71
VCAN-212ENST00000515397 ZNF681Q96N22 645 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 PELOQ9BRX2 385 aaKnown RBP10.6□□□□□ -0.71
VCAN-212ENST00000515397 FAIM2Q9BWQ8 316 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 IQCGQ9H095 443 aaKnown RBP10.6□□□□□ -0.71
VCAN-212ENST00000515397 TUBA8Q9NY65 449 aaPredicted RBP10.6□□□□□ -0.71
VCAN-212ENST00000515397 MAT2BQ9NZL9 334 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 LGALS13Q9UHV8 139 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 LIPGQ9Y5X9 500 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 NINQ8N4C6 2090 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 DNAJC13O75165 2243 aa10.6□□□□□ -0.71
VCAN-212ENST00000515397 UNC79Q9P2D8 2635 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 ATP6AP2A0A1C7CYW4 349 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 WDR91A4D1P6 747 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 TRIM13O60858 407 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 ATP6AP2O75787 350 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 CBX7O95931 251 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 P04436 131 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 RFPL3SP0C7P2 107 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 ABOP16442 354 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 CSNK2A2P19784 350 aaPredicted RBP10.59□□□□□ -0.71
VCAN-212ENST00000515397 TIA1P31483 386 aaKnown RBP eCLIP10.59□□□□□ -0.71
VCAN-212ENST00000515397 GALNSP34059 522 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 MAGEA5P43359 124 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 FBXW4P57775 412 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 TRA2BP62995 288 aaKnown RBP10.59□□□□□ -0.71
VCAN-212ENST00000515397 FOXO1Q12778 655 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 CDSNQ15517 529 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 PRICKLE4Q2TBC4 344 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 HLA-DQA1Q5Y7H0 255 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 SLC22A10Q63ZE4 541 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 DOLPP1Q86YN1 238 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 GPALPP1Q8IXQ4 340 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 VWA5B2Q8N398 1253 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 TMEM251Q8N6I4 163 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 ZNF441Q8N8Z8 693 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 ZFP62Q8NB50 900 aaPredicted RBP10.59□□□□□ -0.71
VCAN-212ENST00000515397 OR52R1Q8NGF1 315 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 OR9A2Q8NGT5 310 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 OR2T11Q8NH01 316 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 SLC22A8Q8TCC7 542 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 GFM2Q969S9 779 aaKnown RBP10.59□□□□□ -0.71
VCAN-212ENST00000515397 ADIPOR1Q96A54 375 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 SPACA9Q96E40 222 aaPredicted RBP10.59□□□□□ -0.71
VCAN-212ENST00000515397 EGLN2Q96KS0 407 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 SGCZQ96LD1 299 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 PHF12Q96QT6 1004 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 TTTY12Q9BZ98 90 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 ROPN1BQ9BZX4 212 aaPredicted RBP10.59□□□□□ -0.71
VCAN-212ENST00000515397 NXF5Q9H1B4 397 aaKnown RBP10.59□□□□□ -0.71
VCAN-212ENST00000515397 CENPHQ9H3R5 247 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 ROPN1Q9HAT0 212 aaPredicted RBP10.59□□□□□ -0.71
VCAN-212ENST00000515397 PROK2Q9HC23 129 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 SACM1LQ9NTJ5 587 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.59□□□□□ -0.71
VCAN-212ENST00000515397 EHD3Q9NZN3 535 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 GIMAP2Q9UG22 337 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 PSME2Q9UL46 239 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 STK38LQ9Y2H1 464 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 ZNF835Q9Y2P0 537 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 CCL27Q9Y4X3 112 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 ZNF780BQ9Y6R6 833 aa10.59□□□□□ -0.71
VCAN-212ENST00000515397 CACNA1DQ01668 2161 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 CCDC151A5D8V7 595 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 C2orf72A6NCS6 295 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 GOLGA6L10A6NI86 522 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 NPIPA2E9PIF3 369 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 NPIPA3F8WFD2 350 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 CDK2AP1O14519 115 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 AZIN1O14977 448 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 SEC22BO75396 215 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 TPOP07202 933 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 FBXO45P0C2W1 286 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 UROSP10746 265 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 ESRRAP11474 423 aaPredicted RBP10.58□□□□□ -0.72
VCAN-212ENST00000515397 TACR1P25103 407 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 ARRB2P32121 409 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 PTGS2P35354 604 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 ADORA2A-AS1P86434 159 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 ZNF844Q08AG5 666 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 MAP4K2Q12851 820 aa10.58□□□□□ -0.72
VCAN-212ENST00000515397 KRT71Q3SY84 523 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms