RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 PRAMEF2O60811 474 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 TGDSO95455 350 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 IGKV3-11P04433 115 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 CT62P0C5K7 136 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 PCSK2P16519 638 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 AQP5P55064 265 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 DIO3P55073 304 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 NME5P56597 212 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 CLDN8P56748 225 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 NRG3P56975 720 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 SLC37A1P57057 533 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 MRPS35P82673 323 aaKnown RBP13.49□□□□□ -0.25
SNF8-212ENST00000514089 FUT7Q11130 342 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 HSPB3Q12988 150 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 TUBA3CQ13748 450 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 ZNF169Q14929 603 aaPredicted RBP13.49□□□□□ -0.25
SNF8-212ENST00000514089 EXOSC7Q15024 291 aaKnown RBP13.49□□□□□ -0.25
SNF8-212ENST00000514089 OR1C1Q15619 314 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 PLEKHN1Q494U1 663 aaPredicted RBP13.49□□□□□ -0.25
SNF8-212ENST00000514089 TRMT12Q53H54 448 aaKnown RBP13.49□□□□□ -0.25
SNF8-212ENST00000514089 SLC6A19Q695T7 634 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 TUBA3EQ6PEY2 450 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 C16orf47Q6ZP98 133 aaPredicted RBP13.49□□□□□ -0.25
SNF8-212ENST00000514089 LARP4Q71RC2 724 aaKnown RBP eCLIP13.49□□□□□ -0.254e-7■■□□□ 13.6
SNF8-212ENST00000514089 SZRD1Q7Z422 152 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 KRTCAP2Q8N6L1 136 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 VPS37AQ8NEZ2 397 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 OR7A2PQ8NGA2 310 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 NUBPLQ8TB37 319 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 CIDECQ96AQ7 238 aaPredicted RBP13.49□□□□□ -0.25
SNF8-212ENST00000514089 RILPQ96NA2 401 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 AMDHD1Q96NU7 426 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 RNF32Q9H0A6 362 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 GLIPR2Q9H4G4 154 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 DDX18Q9NVP1 670 aaKnown RBP13.49□□□□□ -0.25
SNF8-212ENST00000514089 HPF1Q9NWY4 346 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 TAS2R9Q9NYW1 312 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 MAT2BQ9NZL9 334 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 ATP6V1HQ9UI12 483 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 ZNF223Q9UK11 482 aaPredicted RBP13.49□□□□□ -0.25
SNF8-212ENST00000514089 PCDHGB4Q9UN71 923 aa13.49□□□□□ -0.25
SNF8-212ENST00000514089 A0A1W2PRB8 838 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 CAPN14A8MX76 684 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 UBDO15205 165 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 SLC28A2O43868 658 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 PRKNO60260 465 aaPredicted RBP13.48□□□□□ -0.25
SNF8-212ENST00000514089 MAN1A2O60476 641 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 COQ9O75208 318 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 SLITRK5O94991 958 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 CD97P48960 835 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 TNFSF10P50591 281 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 HLCSP50747 726 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 NR0B1P51843 470 aaKnown RBP13.48□□□□□ -0.25
SNF8-212ENST00000514089 PRKAG1P54619 331 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 DUSP2Q05923 314 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 MAPKAPK3Q16644 382 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 LSM12Q3MHD2 195 aaKnown RBP13.48□□□□□ -0.25
SNF8-212ENST00000514089 SPDYE7PQ495Y7 208 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 SLC9B1Q4ZJI4 515 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 SPINK14Q6IE38 97 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 OPN5Q6U736 354 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 TMEM107Q6UX40 140 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 IL20RBQ6UXL0 311 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 Q6ZS92 163 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 ZNF605Q86T29 641 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 ACTRT2Q8TDY3 377 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 ERP27Q96DN0 273 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 THOC1Q96FV9 657 aaKnown RBP13.48□□□□□ -0.25
SNF8-212ENST00000514089 WWTR1Q9GZV5 400 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 C3orf14Q9HBI5 128 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 KLHL1Q9NR64 748 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 ASIC5Q9NY37 505 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 EXO1Q9UQ84 846 aaKnown RBP13.48□□□□□ -0.25
SNF8-212ENST00000514089 SNX8Q9Y5X2 465 aa13.48□□□□□ -0.25
SNF8-212ENST00000514089 TBX19O60806 448 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 TROVE2P10155 538 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNF8-212ENST00000514089 LAMP1P11279 417 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 IDO1P14902 403 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 IDH3AP50213 366 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 CLNS1AP54105 237 aaKnown RBP13.47□□□□□ -0.25
SNF8-212ENST00000514089 STX1BP61266 288 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 GUCY1A3Q02108 690 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 SRSF11Q05519 484 aaKnown RBP13.47□□□□□ -0.25
SNF8-212ENST00000514089 ZNHIT3Q15649 155 aaPredicted RBP13.47□□□□□ -0.25
SNF8-212ENST00000514089 PRSS53Q2L4Q9 553 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 MPEG1Q2M385 716 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 ZNF628Q5EBL2 1059 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 PIGGQ5H8A4 983 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 ZNF766Q5HY98 468 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 OGFOD2Q6N063 350 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 EPGNQ6UW88 154 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 RGS9BPQ6ZS82 235 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 ZNF551Q7Z340 670 aaPredicted RBP13.47□□□□□ -0.25
SNF8-212ENST00000514089 C9orf40Q8IXQ3 194 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 GPALPP1Q8IXQ4 340 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 CYP4Z2PQ8N1L4 340 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 ZNF615Q8N8J6 731 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 FAM98AQ8NCA5 519 aaKnown RBP13.47□□□□□ -0.25
SNF8-212ENST00000514089 C16orf52Q8NHV5 167 aa13.47□□□□□ -0.25
SNF8-212ENST00000514089 ZNF675Q8TD23 568 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms