RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SEMA4CQ9C0C4 833 aa9.12□□□□□ -0.95
TOPBP1-209ENST00000513818 LHPPQ9H008 270 aa9.12□□□□□ -0.95
TOPBP1-209ENST00000513818 CXorf21Q9HAI6 301 aa9.12□□□□□ -0.95
TOPBP1-209ENST00000513818 MMP25Q9NPA2 562 aa9.12□□□□□ -0.95
TOPBP1-209ENST00000513818 ZNF71Q9NQZ8 489 aaPredicted RBP9.12□□□□□ -0.95
TOPBP1-209ENST00000513818 ATP6V1HQ9UI12 483 aa9.12□□□□□ -0.95
TOPBP1-209ENST00000513818 PSME2Q9UL46 239 aa9.12□□□□□ -0.95
TOPBP1-209ENST00000513818 TP53TG5Q9Y2B4 290 aa9.12□□□□□ -0.95
TOPBP1-209ENST00000513818 DTX4Q9Y2E6 619 aa9.12□□□□□ -0.95
TOPBP1-209ENST00000513818 CSAG2Q9Y5P2 127 aa9.12□□□□□ -0.95
TOPBP1-209ENST00000513818 CACNA1BQ00975 2339 aa9.12□□□□□ -0.95
TOPBP1-209ENST00000513818 SPENQ96T58 3664 aaKnown RBP9.12□□□□□ -0.95
TOPBP1-209ENST00000513818 PIEZO2Q9H5I5 2752 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 TGDSO95455 350 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 C6orf47O95873 294 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 IGKV3-11P04433 115 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 ATP1B1P05026 303 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 ABCB1P08183 1280 aaPredicted RBP9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 PRPS1L1P21108 318 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 GPC1P35052 558 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 CD97P48960 835 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 GPR143P51810 404 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 RHDQ02161 417 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 RPS6KA2Q15349 733 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 CEBPEQ15744 281 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 FAM174BQ3ZCQ3 159 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 TRMT12Q53H54 448 aaKnown RBP9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 CPTPQ5TA50 214 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 C6orf163Q5TEZ5 329 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 IRAK1BP1Q5VVH5 260 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 RNF111Q6ZNA4 994 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 SZRD1Q7Z422 152 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 WDR53Q7Z5U6 358 aaPredicted RBP9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 CLEC4FQ8N1N0 589 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 MORN4Q8NDC4 146 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 OR7G2Q8NG99 324 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 OR52R1Q8NGF1 315 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 OR1N1Q8NGS0 311 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 FBXO30Q8TB52 745 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 M1APQ8TC57 530 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 ELP5Q8TE02 316 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 CHMP6Q96FZ7 201 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 ABHD17AQ96GS6 310 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 CCDC28BQ9BUN5 200 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 ZNF552Q9H707 407 aaPredicted RBP9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 ANKRD10Q9NXR5 420 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 COPS7AQ9UBW8 275 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 BCAP29Q9UHQ4 241 aa9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 COPG1Q9Y678 874 aaKnown RBP9.11□□□□□ -0.95
TOPBP1-209ENST00000513818 MKRN2OSH3BPM6 223 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 WWP2O00308 870 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 NR5A2O00482 541 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 DYRK3O43781 588 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 CEACAM4O75871 244 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 CBX7O95931 251 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 IDO1P14902 403 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 NCF2P19878 526 aaPredicted RBP9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 S1PR1P21453 382 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 DRD4P21917 467 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 SOAT1P35610 550 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 CLCN2P51788 898 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 ARFIP2P53365 341 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 WNT3P56703 355 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 STX1BP61266 288 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 PHC1P78364 1004 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 UBAP2LQ14157 1087 aaKnown RBP9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 TERF2Q15554 542 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 OCLNQ16625 522 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 TIGD2Q4W5G0 525 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 PDCD4Q53EL6 469 aaKnown RBP9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 TCTN3Q6NUS6 607 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 R3HCC1LQ7Z5L2 792 aaKnown RBP9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 BEST3Q8N1M1 668 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 MIER2Q8N344 545 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 C9orf43Q8TAL5 461 aaPredicted RBP9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 C10orf82Q8WW14 230 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 MTERF3Q96E29 417 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 OTUB1Q96FW1 271 aaPredicted RBP9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 BBC3Q96PG8 261 aaPredicted RBP9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 ELAC2Q9BQ52 826 aaKnown RBP9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 DUSP26Q9BV47 211 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 ITPAQ9BY32 194 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 DEFB126Q9BYW3 111 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 CDCP1Q9H5V8 836 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 PIF1Q9H611 641 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 CLMPQ9H6B4 373 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 EQTNQ9NQ60 294 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 TAS2R7Q9NYW3 318 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 PLA2G3Q9NZ20 509 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 LUZP4Q9P127 313 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 PPIEQ9UNP9 301 aaKnown RBP9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 WBP11Q9Y2W2 641 aaKnown RBP9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 ZFYVE26Q68DK2 2539 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 IGSF10Q6WRI0 2623 aa9.1□□□□□ -0.95
TOPBP1-209ENST00000513818 A0A1W2PRB8 838 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 TMEM200CA6NKL6 621 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ERVH48-1M5A8F1 160 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 CFLARO15519 480 aa9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 ZNF354AO60765 605 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-209ENST00000513818 TBX19O60806 448 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 192.4 ms