RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PIK3R3Q92569 461 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 CCDC127Q96BQ5 260 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 CDKN2AIPNLQ96HQ2 116 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 GMPPAQ96IJ6 420 aaPredicted RBP3.72□□□□□ -1.81
HTT-210ENST00000512909 ANKRD36BP1Q96IX9 119 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 SENP8Q96LD8 212 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 GDAP1L1Q96MZ0 367 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 TSSK2Q96PF2 358 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 C17orf62Q9BQA9 187 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 CLEC7AQ9BXN2 247 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 RBAKQ9NYW8 714 aaPredicted RBP3.72□□□□□ -1.81
HTT-210ENST00000512909 HACD3Q9P035 362 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 TRPC4Q9UBN4 977 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 DNAJB9Q9UBS3 223 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 PRDM4Q9UKN5 801 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 PPP1R3CQ9UQK1 317 aa3.72□□□□□ -1.81
HTT-210ENST00000512909 CEP290O15078 2479 aa3.71□□□□□ -1.81
HTT-210ENST00000512909 TTC26A0AVF1 554 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 C5orf52A6NGY3 159 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 SDR42E2A6NKP2 422 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 KPNA7A9QM74 516 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 SLC1A7O00341 560 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 ZNF195O14628 629 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 SELENOFO60613 162 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 SEC24AO95486 1093 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 PDGFBP01127 241 aaPredicted RBP3.71□□□□□ -1.82
HTT-210ENST00000512909 IGLV1-44P01699 117 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 YES1P07947 543 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 CD48P09326 243 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 ODC1P11926 461 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 CEACAM1P13688 526 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 SLC1A3P43003 542 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 SYKP43405 635 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 GLIPR1P48060 266 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 TUFMP49411 452 aaKnown RBP3.71□□□□□ -1.82
HTT-210ENST00000512909 TAF6P49848 677 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 DCDC1P59894 354 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 STX1BP61266 288 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 KRT83P78385 493 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 SIGLEC14Q08ET2 396 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 TWF1Q12792 350 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 HNRNPA0Q13151 305 aaKnown RBP3.71□□□□□ -1.82
HTT-210ENST00000512909 MAPK11Q15759 364 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 ACKR1Q16570 336 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 HLA-BQ31612 363 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 ZFP69Q49AA0 526 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 IQCCQ4KMZ1 466 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 SLC39A12Q504Y0 691 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 LBHQ53QV2 105 aaPredicted RBP3.71□□□□□ -1.82
HTT-210ENST00000512909 ZNF542PQ5EBM4 170 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 ARMCX4Q5H9R4 360 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 WSCD1Q658N2 575 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 ATL3Q6DD88 541 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 FAM166AQ6J272 317 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 PWWP2BQ6NUJ5 590 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 TRIM65Q6PJ69 517 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 FIP1L1Q6UN15 594 aaKnown RBP3.71□□□□□ -1.82
HTT-210ENST00000512909 GBP6Q6ZN66 633 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 USP43Q70EL4 1123 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 BHLHA9Q7RTU4 235 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 ZER1Q7Z7L7 766 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 LACC1Q8IV20 430 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 APLFQ8IW19 511 aaPredicted RBP3.71□□□□□ -1.82
HTT-210ENST00000512909 UBALD2Q8IYN6 164 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 GPD1LQ8N335 351 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 LRRC15Q8TF66 581 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 DNAJC19Q96DA6 116 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 LGALS12Q96DT0 336 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 SGF29Q96ES7 293 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 PAGE5Q96GU1 130 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 IL12RB2Q99665 862 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 CBWD1Q9BRT8 395 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 TRIM51Q9BSJ1 452 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 MED10Q9BTT4 135 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 PI4K2AQ9BTU6 479 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 ASB7Q9H672 318 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 C3orf14Q9HBI5 128 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 FGF22Q9HCT0 170 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 RAB9BQ9NP90 201 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 ATAD3AQ9NVI7 634 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 MTRRQ9UBK8 725 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 ELF5Q9UKW6 265 aaPredicted RBP3.71□□□□□ -1.82
HTT-210ENST00000512909 TANC1Q9C0D5 1861 aa3.71□□□□□ -1.82
HTT-210ENST00000512909 CLUHO75153 1309 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 PVALEFA0A1B0GWK0 134 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 LRRD1A4D1F6 860 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 PRSS46E5RG02 174 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 SLC30A4O14863 429 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 PGRMC2O15173 223 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 ST8SIA3O43173 380 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 SCO2O43819 266 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 CALUO43852 315 aaPredicted RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 KRT33AO76009 404 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 GAS8O95995 478 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 GPIP06744 558 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 GSTA2P09210 222 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 ANKRD34CP0C6C1 535 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 TRIM49P0CI25 452 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 TRIM49CP0CI26 452 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 KRT13P13646 458 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms