RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	BMF	Q96LC9	184 aa		4.98	□□□□□ -1.61
MATR3-218	ENST00000511978	SMIM14	Q96QK8	99 aa		4.98	□□□□□ -1.61
MATR3-218	ENST00000511978	MCCC1	Q96RQ3	725 aa	Predicted RBP	4.98	□□□□□ -1.61
MATR3-218	ENST00000511978	VAT1	Q99536	393 aa		4.98	□□□□□ -1.61
MATR3-218	ENST00000511978	SLC25A51	Q9H1U9	297 aa		4.98	□□□□□ -1.61
MATR3-218	ENST00000511978	C10orf88	Q9H8K7	445 aa		4.98	□□□□□ -1.61
MATR3-218	ENST00000511978	UBTD1	Q9HAC8	227 aa		4.98	□□□□□ -1.61
MATR3-218	ENST00000511978	MBNL1	Q9NR56	388 aa	Known RBP	4.98	□□□□□ -1.61
MATR3-218	ENST00000511978	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.98	□□□□□ -1.61
MATR3-218	ENST00000511978	RSPH14	Q9UHP6	348 aa		4.98	□□□□□ -1.61
MATR3-218	ENST00000511978	RPL26L1	Q9UNX3	145 aa	Known RBP	4.98	□□□□□ -1.61
MATR3-218	ENST00000511978	CHKB	Q9Y259	395 aa		4.98	□□□□□ -1.61
MATR3-218	ENST00000511978	PI4KA	P42356	2102 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	SDK1	Q7Z5N4	2213 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	RIF1	Q5UIP0	2472 aa	Known RBP	4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	DOCK9	Q9BZ29	2069 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	SCN8A	Q9UQD0	1980 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978		A0A0U1RQS6	177 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	C1orf232	A0A0U1RR37	186 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	SPTY2D1-AS1	A0A0U1RR47	76 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	MED19	A0JLT2	244 aa	Predicted RBP	4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	LILRA5	A6NI73	299 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	FAM90A26	D6RGX4	464 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	PSMD11	O00231	422 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	CLGN	O14967	610 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	SLC4A1	P02730	911 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	CEACAM1	P13688	526 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	HLA-DOB	P13765	273 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	ZNF30	P17039	623 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	TMEM11	P17152	192 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	HOXB6	P17509	224 aa	Known RBP	4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	GABRB1	P18505	474 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	MCM3	P25205	808 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	GAS1	P54826	345 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	DRG2	P55039	364 aa	Known RBP	4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	REL	Q04864	619 aa	Predicted RBP	4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	RPS6KA1	Q15418	735 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	WSCD2	Q2TBF2	565 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	ZNF542P	Q5EBM4	170 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	NSUN5P2	Q63ZY6	315 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	ITPRIPL1	Q6GPH6	555 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	PAPD4	Q6PIY7	484 aa	Known RBP	4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	RNF113B	Q8IZP6	322 aa	Known RBP	4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	ZNF567	Q8N184	647 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	IPMK	Q8NFU5	416 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	TRIM58	Q8NG06	486 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	OR1J2	Q8NGS2	313 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	TRPC4AP	Q8TEL6	797 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	TADA1	Q96BN2	335 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	DTD2	Q96FN9	168 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	SCRN2	Q96FV2	425 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	PGAM5	Q96HS1	289 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	TRIB3	Q96RU7	358 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	LYSMD1	Q96S90	227 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	FERMT1	Q9BQL6	677 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	KRTAP1-5	Q9BYS1	174 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	CSTL1	Q9H114	145 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	GBA3	Q9H227	469 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	ZNF556	Q9HAH1	456 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	FBXL17	Q9UF56	701 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	FAM153A	Q9UHL3	310 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	CD84	Q9UIB8	345 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	FBXL2	Q9UKC9	423 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	DNPEP	Q9ULA0	475 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	PADI1	Q9ULC6	663 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	PPIL1	Q9Y3C6	166 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	ZNF711	Q9Y462	761 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	OR1A2	Q9Y585	309 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	CACNA1E	Q15878	2313 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	TRPM6	Q9BX84	2022 aa		4.97	□□□□□ -1.61
MATR3-218	ENST00000511978	ZNF106	Q9H2Y7	1883 aa	Known RBP	4.96	□□□□□ -1.61
MATR3-218	ENST00000511978	WDR87	Q6ZQQ6	2873 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	AGAP14	A8MT82	685 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	CDRT15L2	A8MXV6	281 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	ANKRD66	B4E2M5	251 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	PRAC2	D3DTV9	90 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	PTGES3L	E9PB15	166 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	CACNB4	O00305	520 aa	Predicted RBP	4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	AP3D1	O14617	1153 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	KCNN4	O15554	427 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	ZNF189	O75820	626 aa	Predicted RBP	4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	SOD1	P00441	154 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	CSF2	P04141	144 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	HIST1H2AB	P04908	130 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	PIRT	P0C851	137 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	MYOD1	P15172	320 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	ITGA2	P17301	1181 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	HIST1H2AD	P20671	130 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	DGKA	P23743	735 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	PSMB4	P28070	264 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	TNNT3	P45378	269 aa	Predicted RBP	4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	STC1	P52823	247 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	CLDN20	P56880	219 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	KIAA1024L	P59773	190 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	ERVFC1-1	P60608	527 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	CDK3	Q00526	305 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	CDC16	Q13042	620 aa		4.96	□□□□□ -1.62
MATR3-218	ENST00000511978	CDKN3	Q16667	212 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms