RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 MIPOL1Q8TD10 442 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 LMX1AQ8TE12 382 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 NUS1Q96E22 293 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 SPDL1Q96EA4 605 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 RBM41Q96IZ5 413 aaKnown RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 PITPNM3Q9BZ71 974 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 SEMA4CQ9C0C4 833 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 SLC39A8Q9C0K1 460 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 DPEP2Q9H4A9 486 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 TRIM45Q9H8W5 580 aaPredicted RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 WDR54Q9H977 334 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 COX16Q9P0S2 106 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 VANGL2Q9ULK5 521 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 WDR37Q9Y2I8 494 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 EPN1Q9Y6I3 576 aaPredicted RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 CPED1A4D0V7 1026 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 C5orf60A6NFR6 353 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 RHODO00212 210 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 EPHB6O15197 1021 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 SNAP91O60641 907 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 NEURL1O76050 574 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 CLDN7O95471 211 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 PLAUP00749 431 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 INHBAP08476 426 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 VCLP18206 1134 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 ITGB6P18564 788 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 EEF1DP29692 281 aaKnown RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 ADRA1AP35348 466 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 COMPP49747 757 aaPredicted RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 NUMBP49757 651 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 TAS2R40P59535 323 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 TPI1P60174 286 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 GNG11P61952 73 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 ACY1Q03154 408 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 HIST2H2ACQ16777 129 aaPredicted RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 HYAL4Q2M3T9 481 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 ERCC6LQ2NKX8 1250 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 CDKL4Q5MAI5 379 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 ARMC12Q5T9G4 340 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 ALS2CLQ60I27 953 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 SEL1L3Q68CR1 1132 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 CAPRIN2Q6IMN6 1127 aaKnown RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 IRGCQ6NXR0 463 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 RAPH1Q70E73 1250 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 PAQR4Q8N4S7 273 aaPredicted RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 LINC00469Q8N7U9 141 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 OR8K1Q8NGG5 319 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 PTPMT1Q8WUK0 201 aaPredicted RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 MAIP1Q8WWC4 291 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.66□□□□□ -1.66
NEK1-204ENST00000509912 ZNF75CPQ92670 426 aaPredicted RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 ST6GALNAC6Q969X2 333 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 DAZAP1Q96EP5 407 aaKnown RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 ATXN7L3BQ96GX2 97 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 CABS1Q96KC9 395 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 RNF157Q96PX1 679 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 OR2M4Q96R27 311 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 GFM1Q96RP9 751 aaKnown RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 FAM207AQ9NSI2 230 aaPredicted RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 P4HTMQ9NXG6 502 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 TTC7AQ9ULT0 858 aaPredicted RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 SH2B3Q9UQQ2 575 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 CCL27Q9Y4X3 112 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 ANKRD36A6QL64 1941 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 GCN1Q92616 2671 aaKnown RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 HEATR9A2RTY3 570 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 MIF4GDA9UHW6 222 aaKnown RBP4.65□□□□□ -1.66
NEK1-204ENST00000509912 KIF2AO00139 706 aaPredicted RBP4.65□□□□□ -1.66
NEK1-204ENST00000509912 ERGP11308 486 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 ERCC2P18074 760 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 HMGCLP35914 325 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 SPINT3P49223 89 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 RHOAP61586 193 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 PSPHP78330 225 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 MRPS35P82673 323 aaKnown RBP4.65□□□□□ -1.66
NEK1-204ENST00000509912 CDK3Q00526 305 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 ACTN3Q08043 901 aaPredicted RBP4.65□□□□□ -1.66
NEK1-204ENST00000509912 BNIP1Q12981 228 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 NME3Q13232 169 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 BIKQ13323 160 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 ITGA9Q13797 1035 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 Q6YL49 198 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 C1QL4Q86Z23 238 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 WDR20Q8TBZ3 569 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 ZNF564Q8TBZ8 553 aaPredicted RBP4.65□□□□□ -1.66
NEK1-204ENST00000509912 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.65□□□□□ -1.66
NEK1-204ENST00000509912 CMKLR1Q99788 373 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 PIMREGQ9BSJ6 248 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 PCGF1Q9BSM1 259 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 RAB11FIP5Q9BXF6 653 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 CACNG6Q9BXT2 260 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 SHCBP1LQ9BZQ2 653 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 ABCG8Q9H221 673 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 MOV10Q9HCE1 1003 aaKnown RBP4.65□□□□□ -1.66
NEK1-204ENST00000509912 HOMER3Q9NSC5 361 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 PARPBPQ9NWS1 579 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 TFR2Q9UP52 801 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 KIF26BQ2KJY2 2108 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 LAMA1P25391 3075 aa4.65□□□□□ -1.66
NEK1-204ENST00000509912 IGHV1OR21-1A0A087WYE8 117 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms