RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 NHSL2Q5HYW2 709 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 HIST2H2AA3Q6FI13 130 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 CYS1Q717R9 158 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 SLC29A4Q7RTT9 530 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 ADGRE4PQ86SQ3 457 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 CXorf67Q86X51 503 aaPredicted RBP12.2□□□□□ -0.46
DDX41-210ENST00000509576 LACC1Q8IV20 430 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 CHDHQ8NE62 594 aaPredicted RBP12.2□□□□□ -0.46
DDX41-210ENST00000509576 STAG3L4Q8TBR4 150 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 HGDQ93099 445 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 CDK15Q96Q40 435 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 ZNF629Q9UEG4 869 aaPredicted RBP12.2□□□□□ -0.46
DDX41-210ENST00000509576 PHF11Q9UIL8 331 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 SPACA6W5XKT8 324 aa12.2□□□□□ -0.46
DDX41-210ENST00000509576 CUBNO60494 3623 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 CSPG4Q6UVK1 2322 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 C2orf92A0A1B0GVN3 265 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 CD8B2A6NJW9 211 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 OR6C76A6NM76 312 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 H0YIV9 168 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 DVL2O14641 736 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 GNB5O14775 395 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 OR10H2O60403 315 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 TRAPPC6AO75865 159 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 ABCB1P08183 1280 aaPredicted RBP12.19□□□□□ -0.46
DDX41-210ENST00000509576 LTA4HP09960 611 aaKnown RBP12.19□□□□□ -0.46
DDX41-210ENST00000509576 SLC35E2P0CK97 266 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 EPXP11678 715 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 GPX3P22352 226 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 ABCD3P28288 659 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 GALNSP34059 522 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 RAP1GDS1P52306 607 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 PPP2R2AP63151 447 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 GUCY2DQ02846 1103 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 SLMAPQ14BN4 828 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 CPSF6Q16630 551 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX41-210ENST00000509576 FAM180BQ6P0A1 224 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 FAM111BQ6SJ93 734 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 C3orf62Q6ZUJ4 267 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 RPS27LQ71UM5 84 aaKnown RBP12.19□□□□□ -0.46
DDX41-210ENST00000509576 GOLGA7Q7Z5G4 137 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 YRDCQ86U90 279 aaKnown RBP12.19□□□□□ -0.46
DDX41-210ENST00000509576 PLD6Q8N2A8 252 aaKnown RBP12.19□□□□□ -0.46
DDX41-210ENST00000509576 CIARTQ8N365 385 aaPredicted RBP12.19□□□□□ -0.46
DDX41-210ENST00000509576 LIX1Q8N485 282 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 PPM1NQ8N819 430 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 L3MBTL4Q8NA19 623 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 FAM83FQ8NEG4 500 aaPredicted RBP12.19□□□□□ -0.46
DDX41-210ENST00000509576 OR52B6Q8NGF0 335 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 UBE2E3Q969T4 207 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 ARSGQ96EG1 525 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 ART5Q96L15 291 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 TRIB1Q96RU8 372 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 TUBA1CQ9BQE3 449 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 ZBTB26Q9HCK0 441 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 GALNT9Q9HCQ5 603 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 MS4A12Q9NXJ0 267 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 CES1P1Q9UKY3 287 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 CAMK2AQ9UQM7 478 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 WIF1Q9Y5W5 379 aa12.19□□□□□ -0.46
DDX41-210ENST00000509576 CCDC188H7C350 402 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 RAF1P04049 648 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 C2P06681 752 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 FOSL1P15407 271 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 EPB42P16452 691 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 SERPINB1P30740 379 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 DGKQP52824 942 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 LTBQ06643 244 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 CUL3Q13618 768 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 EXOSC7Q15024 291 aaKnown RBP12.18□□□□□ -0.46
DDX41-210ENST00000509576 PFKFB4Q16877 469 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 LIPJQ5W064 366 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 TIGD3Q6B0B8 471 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 MAATS1Q7Z4T9 603 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 MYLK4Q86YV6 388 aaPredicted RBP12.18□□□□□ -0.46
DDX41-210ENST00000509576 CTAGE3PQ8IX95 158 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 DND1Q8IYX4 353 aaKnown RBP12.18□□□□□ -0.46
DDX41-210ENST00000509576 VWA5B2Q8N398 1253 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 WDSUB1Q8N9V3 476 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 FBF1Q8TES7 1133 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 TP53INP1Q96A56 240 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 TMEM41AQ96HV5 264 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 NSUN5Q96P11 429 aaKnown RBP12.18□□□□□ -0.46
DDX41-210ENST00000509576 ERP44Q9BS26 406 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 OR10A5Q9H207 317 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 LYARQ9NX58 379 aaKnown RBP12.18□□□□□ -0.46
DDX41-210ENST00000509576 WHRNQ9P202 907 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 ZNF639Q9UID6 485 aa12.18□□□□□ -0.46
DDX41-210ENST00000509576 RTTNQ86VV8 2226 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 TUBAL3A6NHL2 446 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 CLCA1A8K7I4 914 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 EEF1E1-BLOC1S5C9J1V9 151 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 FAM47E-STBD1D6RA91 191 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 PPP6CO00743 305 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 EIF3HO15372 352 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDX41-210ENST00000509576 EEF1E1O43324 174 aaKnown RBP12.17□□□□□ -0.46
DDX41-210ENST00000509576 CBX7O95931 251 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 S100BP04271 92 aaPredicted RBP12.17□□□□□ -0.46
DDX41-210ENST00000509576 CTSSP25774 331 aa12.17□□□□□ -0.46
DDX41-210ENST00000509576 SPRP35270 261 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms