RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 IGKV3-15P01624 115 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 NCF1P14598 390 aaPredicted RBP4.04□□□□□ -1.76
GYPA-205ENST00000508337 CCNA2P20248 432 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 PPP2R1BP30154 601 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 FHITP49789 147 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 GSK3BP49841 420 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 CASP9P55211 416 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 ADARP55265 1226 aaKnown RBP4.04□□□□□ -1.76
GYPA-205ENST00000508337 TRA2BP62995 288 aaKnown RBP4.04□□□□□ -1.76
GYPA-205ENST00000508337 NPRL3Q12980 569 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 MEP1BQ16820 701 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 HFEQ30201 348 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 SLC39A12Q504Y0 691 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 ZNF789Q5FWF6 425 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 C12orf60Q5U649 245 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 TAF3Q5VWG9 929 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 ARMCX5Q6P1M9 558 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 TMEM270Q6UE05 265 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 REG3GQ6UW15 175 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 CACUL1Q86Y37 369 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 TMEM126BQ8IUX1 230 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 CDH26Q8IXH8 852 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 ZBED8Q8IZ13 594 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 LINC00612Q8N6U2 182 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 CSNK1G2-AS1Q8NCQ2 148 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 OR6C4Q8NGE1 309 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 AGR3Q8TD06 166 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 ST7LQ8TDW4 575 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 GGHQ92820 318 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 SERAC1Q96JX3 654 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 ZNF396Q96N95 335 aaPredicted RBP4.04□□□□□ -1.76
GYPA-205ENST00000508337 ERGIC2Q96RQ1 377 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 RUFY1Q96T51 708 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 CACNG6Q9BXT2 260 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 HSD3B7Q9H2F3 369 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 IL1RAPL2Q9NP60 686 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 MRPL17Q9NRX2 175 aaKnown RBP4.04□□□□□ -1.76
GYPA-205ENST00000508337 SLC35D1Q9NTN3 355 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 FAM153AQ9UHL3 310 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 MRPL11Q9Y3B7 192 aaKnown RBP4.04□□□□□ -1.76
GYPA-205ENST00000508337 V9GYY5 206 aaPredicted RBP4.04□□□□□ -1.76
GYPA-205ENST00000508337 SPATA31D1Q6ZQQ2 1576 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 IGHV3-16A0A0C4DH30 117 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 SHISA7A6NL88 538 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 K7EQG2 157 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 CTAGE5O15320 804 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 MAGEB3O15480 346 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 GMNNO75496 209 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 OR6A2O95222 327 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 ALPPP05187 535 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 ALPPL2P10696 532 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 ELK3P41970 407 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 BRCC3P46736 316 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 ATXN3P54252 364 aaPredicted RBP4.03□□□□□ -1.76
GYPA-205ENST00000508337 NME5P56597 212 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 ARF5P84085 180 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 ITPK1Q13572 414 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 RUNX3Q13761 415 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 SPHARQ15513 63 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 CCDC57Q2TAC2 916 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 C1orf189Q5VU69 101 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 SERINC5Q86VE9 423 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 MARCH9Q86YJ5 346 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 ZNF781Q8N8C0 355 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 CNNM3Q8NE01 707 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 OR56B2PQ8NGI1 322 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 URGCPQ8TCY9 931 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.03□□□□□ -1.76
GYPA-205ENST00000508337 MRPL24Q96A35 216 aaKnown RBP4.03□□□□□ -1.76
GYPA-205ENST00000508337 RAB7BQ96AH8 199 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 C16orf58Q96GQ5 468 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 PANX3Q96QZ0 392 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 HSD17B14Q9BPX1 270 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 APOL2Q9BQE5 337 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 CRLF2Q9HC73 371 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 POLE3Q9NRF9 147 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 TRPC4Q9UBN4 977 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 KCNK6Q9Y257 313 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 RPH3AQ9Y2J0 694 aaPredicted RBP4.03□□□□□ -1.76
GYPA-205ENST00000508337 FBXO7Q9Y3I1 522 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 OR1A2Q9Y585 309 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 CLCA3PQ9Y6N3 262 aa4.03□□□□□ -1.76
GYPA-205ENST00000508337 TP53BP1Q12888 1972 aaPredicted RBP4.03□□□□□ -1.76
GYPA-205ENST00000508337 UMODL1Q5DID0 1318 aa4.02□□□□□ -1.77
GYPA-205ENST00000508337 LRRIQ4A6NIV6 560 aa4.02□□□□□ -1.77
GYPA-205ENST00000508337 RPL37AP8A6NKH3 93 aa4.02□□□□□ -1.77
GYPA-205ENST00000508337 SRRM5B3KS81 715 aa4.02□□□□□ -1.77
GYPA-205ENST00000508337 KIF2AO00139 706 aaPredicted RBP4.02□□□□□ -1.77
GYPA-205ENST00000508337 POLR3GO15318 223 aaPredicted RBP4.02□□□□□ -1.77
GYPA-205ENST00000508337 CSO75390 466 aaKnown RBP4.02□□□□□ -1.77
GYPA-205ENST00000508337 AKR7A3O95154 331 aa4.02□□□□□ -1.77
GYPA-205ENST00000508337 TPM1P09493 284 aa4.02□□□□□ -1.77
GYPA-205ENST00000508337 ODC1P11926 461 aa4.02□□□□□ -1.77
GYPA-205ENST00000508337 CD9P21926 228 aa4.02□□□□□ -1.77
GYPA-205ENST00000508337 RPA1P27694 616 aa4.02□□□□□ -1.77
GYPA-205ENST00000508337 ADSSP30520 456 aa4.02□□□□□ -1.77
GYPA-205ENST00000508337 CTNNB1P35222 781 aa4.02□□□□□ -1.77
GYPA-205ENST00000508337 RDXP35241 583 aaKnown RBP4.02□□□□□ -1.77
GYPA-205ENST00000508337 SOX6P35712 828 aa4.02□□□□□ -1.77
GYPA-205ENST00000508337 GBX2P52951 348 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms