RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ARMC8Q8IUR7 673 aa11.47□□□□□ -0.57
LIN54-206ENST00000506560 ARL14Q8N4G2 192 aa11.47□□□□□ -0.57
LIN54-206ENST00000506560 DGCR14Q96DF8 476 aaKnown RBP11.47□□□□□ -0.57
LIN54-206ENST00000506560 RNF31Q96EP0 1072 aa11.47□□□□□ -0.57
LIN54-206ENST00000506560 GIMAP5Q96F15 307 aa11.47□□□□□ -0.57
LIN54-206ENST00000506560 NAALAD2Q9Y3Q0 740 aa11.47□□□□□ -0.57
LIN54-206ENST00000506560 SLC9B1P1A6NJY1 282 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 MAN1A2O60476 641 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 ZNF217O75362 1048 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 JRKO75564 520 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 FOSL2P15408 326 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 CD27P26842 260 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 SLC5A2P31639 672 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 GSTM5P46439 218 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 HLCSP50747 726 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 RNF144AP50876 292 aaPredicted RBP11.46□□□□□ -0.57
LIN54-206ENST00000506560 CDK5R2Q13319 367 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 SEC23BQ15437 767 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 LEXMQ3ZCV2 418 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 TRMT12Q53H54 448 aaKnown RBP11.46□□□□□ -0.57
LIN54-206ENST00000506560 TCTN3Q6NUS6 607 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 ZNF605Q86T29 641 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 SLC16A11Q8NCK7 471 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 NUP43Q8NFH3 380 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 GIPC3Q8TF64 312 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 GTPBP3Q969Y2 492 aaKnown RBP11.46□□□□□ -0.57
LIN54-206ENST00000506560 MAP3K3Q99759 626 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 THSD1Q9NS62 852 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 ORC6Q9Y5N6 252 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 ENPP4Q9Y6X5 453 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 PI4KAP42356 2102 aa11.46□□□□□ -0.57
LIN54-206ENST00000506560 SLC1A7O00341 560 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 FGF17O60258 216 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 CSF2P04141 144 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 ITGAMP11215 1152 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 GFERP55789 205 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 TUBA4AP68366 448 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 RPP38P78345 283 aaKnown RBP11.46□□□□□ -0.58
LIN54-206ENST00000506560 NPRL3Q12980 569 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 SUZ12Q15022 739 aaKnown RBP11.46□□□□□ -0.58
LIN54-206ENST00000506560 TSSK4Q6SA08 328 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 B3GNT8Q7Z7M8 397 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 NATD1Q8N6N6 113 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 CSNK1A1LQ8N752 337 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 ARSGQ96EG1 525 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 OR7D2Q96RA2 312 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 PIP5K1AQ99755 562 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 TBC1D17Q9HA65 648 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 P2RX2Q9UBL9 471 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 SEC14L3Q9UDX4 400 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 GMPPBQ9Y5P6 360 aa11.46□□□□□ -0.58
LIN54-206ENST00000506560 TLR4O00206 839 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 ADAMDEC1O15204 470 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 FCMRO60667 390 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 RDH16O75452 317 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 IGFBP1P08833 259 aaPredicted RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 NME1P15531 152 aaKnown RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 STARD6P59095 220 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 PIN1Q13526 163 aaPredicted RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 RAB39AQ14964 217 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 CEBPEQ15744 281 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 ZC3H12BQ5HYM0 836 aaKnown RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 NKAIN2Q5VXU1 208 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 RNF44Q7L0R7 432 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 OOSP2Q86WS3 158 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 MEX3DQ86XN8 651 aaKnown RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 OR9A4Q8NGU2 314 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 RERGQ96A58 199 aaPredicted RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 MPP4Q96JB8 637 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 KLHL3Q9UH77 587 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 POMT2Q9UKY4 750 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 NDRG4Q9ULP0 352 aaKnown RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 SLC22A7Q9Y694 548 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 ZNF780BQ9Y6R6 833 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 WDFY3Q8IZQ1 3526 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 CENPVL1A0A0U1RR11 272 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 CLDN24A6NM45 220 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 TOR1BO14657 336 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 B3GALT2O43825 422 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 PCDHGA12O60330 932 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 DNAJB5O75953 348 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 IFNW1P05000 195 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 FHP07954 510 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 CDH3P22223 829 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 MPIP34949 423 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 TSFMP43897 325 aaKnown RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 LIMS1P48059 325 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 KCNJ5P48544 419 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 MAN2A2P49641 1150 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 HOXC5Q00444 222 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 CHRNEQ04844 493 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 TGM3Q08188 693 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 MICAQ29983 383 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 GPAT3Q53EU6 434 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 TMEM236Q5W0B7 351 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 XAF1Q6GPH4 301 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 DGAT2L6Q6ZPD8 337 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 CAMKVQ8NCB2 501 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 POP5Q969H6 163 aaKnown RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 NRBF2Q96F24 287 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms