RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 NXPH2O95156 264 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 GNA14O95837 355 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 TSPAN12O95859 305 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 PGK1P00558 417 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 APOA1P02647 267 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 CHRNA1P02708 482 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 SLC35G4P0C7Q5 338 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 FAM106CPP0CH98 169 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 ANXA3P12429 323 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 ARSBP15848 533 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 ACADSP16219 412 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 ZNF3P17036 446 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 LMO1P25800 156 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 RBMS1P29558 406 aaKnown RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 SLC1A4P43007 532 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 RPS5P46782 204 aaKnown RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 CSNK1EP49674 416 aaKnown RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 SELENOPP49908 381 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 CDH6P55285 790 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 MAP3K7CLP57077 242 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 RPS4XP62701 263 aaKnown RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 XIAPP98170 497 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 CCDC173Q0VFZ6 552 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 CNTN1Q12860 1018 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 MFAP5Q13361 173 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 DRP2Q13474 957 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 MESDQ14696 234 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 GANABQ14697 944 aaKnown RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 SF3B4Q15427 424 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 OR1C1Q15619 314 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 FAM83EQ2M2I3 478 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 TMEM44Q2T9K0 475 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 HNRNPA1L2Q32P51 320 aaKnown RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 ZNF829Q3KNS6 432 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 GGTA1PQ4G0N0 100 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 CEP78Q5JTW2 689 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 AGAP7PQ5VUJ5 663 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 AP1ARQ63HQ0 302 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 TWF2Q6IBS0 349 aaKnown RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 OR4C11Q6IEV9 310 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 FAM171BQ6P995 826 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 DLK2Q6UY11 383 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 C19orf35Q6ZS72 473 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 SLC24A5Q71RS6 500 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 SPRED1Q7Z699 444 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 SATL1Q86VE3 508 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 PARGQ86W56 976 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 TMEM17Q86X19 198 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 CLEC4FQ8N1N0 589 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 PYROXD2Q8N2H3 581 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 TCEANCQ8N8B7 351 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 ASCC1Q8N9N2 400 aaKnown RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 OR7A2PQ8NGA2 310 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 RDH11Q8TC12 318 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 ZNF596Q8TC21 504 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 DDI1Q8WTU0 396 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 SCARB1Q8WTV0 552 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 CCDC12Q8WUD4 166 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 SCFD1Q8WVM8 642 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 ST8SIA1Q92185 356 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 SMPDL3AQ92484 453 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 PIK3R3Q92569 461 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 SLCO2A1Q92959 643 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 MYLPFQ96A32 169 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 CATSPER2Q96P56 530 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 AGAP4Q96P64 663 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 CASD1Q96PB1 797 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 ACCSQ96QU6 501 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 CCT8L2Q96SF2 557 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 CDCA3Q99618 268 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 KCNS3Q9BQ31 491 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 NEURL2Q9BR09 285 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 DPH7Q9BTV6 452 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 ST6GALNAC5Q9BVH7 336 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 RAB11FIP5Q9BXF6 653 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 FAM49AQ9H0Q0 323 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 S100A14Q9HCY8 104 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 CCNB1IP1Q9NPC3 277 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 C20orf96Q9NUD7 363 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 OR6C2Q9NZP2 312 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 PIPOXQ9P0Z9 390 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 PSMC3IPQ9P2W1 217 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 IL36RNQ9UBH0 155 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 GHRLQ9UBU3 117 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 WNT16Q9UBV4 365 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 ABCG2Q9UNQ0 655 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 GSTK1Q9Y2Q3 226 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 C15orf41Q9Y2V0 281 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 SLC6A5Q9Y345 797 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 PCDHAC2Q9Y5I4 1007 aa3.3□□□□□ -1.88
HMGB1P22-201ENST00000505315 KIF27Q86VH2 1401 aa3.29□□□□□ -1.88
HMGB1P22-201ENST00000505315 PDS5AQ29RF7 1337 aaKnown RBP3.29□□□□□ -1.88
HMGB1P22-201ENST00000505315 A0A0J9YVX5 310 aa3.29□□□□□ -1.88
HMGB1P22-201ENST00000505315 CD8B2A6NJW9 211 aa3.29□□□□□ -1.88
HMGB1P22-201ENST00000505315 FAM74A7A6NL05 159 aa3.29□□□□□ -1.88
HMGB1P22-201ENST00000505315 ARPC1BO15143 372 aaKnown RBP3.29□□□□□ -1.88
HMGB1P22-201ENST00000505315 DUX1O43812 170 aa3.29□□□□□ -1.88
HMGB1P22-201ENST00000505315 ZNF254O75437 659 aa3.29□□□□□ -1.88
HMGB1P22-201ENST00000505315 UPK3AO75631 287 aa3.29□□□□□ -1.88
HMGB1P22-201ENST00000505315 DFFBO76075 338 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms