RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 MECRQ9BV79 373 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 SORBS1Q9BX66 1292 aaKnown RBP9.15□□□□□ -0.94
NR1I3-220ENST00000505005 BRINP2Q9C0B6 783 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 EPN3Q9H201 632 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 SACM1LQ9NTJ5 587 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 OLAHQ9NV23 265 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 ERVK-19Q9WJR5 959 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 FIS1Q9Y3D6 152 aa9.15□□□□□ -0.94
NR1I3-220ENST00000505005 ATMQ13315 3056 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 TNRC6AQ8NDV7 1962 aaKnown RBP9.14□□□□□ -0.95
NR1I3-220ENST00000505005 A0A1B0GTL3 188 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 WDR91A4D1P6 747 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 ANKRD33BA6NCL7 494 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 OR2W5A6NFC9 320 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 GLOD5A6NK44 160 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 FOXO6A8MYZ6 492 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 MYO1GB0I1T2 1018 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 PIP5K1BO14986 540 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 HDAC3O15379 428 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 NME2P1O60361 137 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 SNX4O95219 450 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 PDGFAP04085 211 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 PRB1P04280 392 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 LBPP18428 481 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 CNR1P21554 472 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 DRD5P21918 477 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 NME2P22392 152 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 LCN1P31025 176 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 GCKP35557 465 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 PPICP45877 212 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 CLK3P49761 638 aaKnown RBP9.14□□□□□ -0.95
NR1I3-220ENST00000505005 HTR6P50406 440 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 MANFP55145 182 aaKnown RBP9.14□□□□□ -0.95
NR1I3-220ENST00000505005 PPP2R2AP63151 447 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 SNRPNP63162 240 aaKnown RBP9.14□□□□□ -0.95
NR1I3-220ENST00000505005 RPL38P63173 70 aaKnown RBP9.14□□□□□ -0.95
NR1I3-220ENST00000505005 TXNL4AP83876 142 aaKnown RBP9.14□□□□□ -0.95
NR1I3-220ENST00000505005 PRR5P85299 388 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 GABPB1Q06547 395 aaPredicted RBP9.14□□□□□ -0.95
NR1I3-220ENST00000505005 SNTA1Q13424 505 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 EFR3AQ14156 821 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 SF3B4Q15427 424 aaKnown RBP eCLIP9.14□□□□□ -0.95
NR1I3-220ENST00000505005 MAPKAPK3Q16644 382 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 PRICKLE4Q2TBC4 344 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 GALNTL6Q49A17 601 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 XKR7Q5GH72 579 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 COLEC12Q5KU26 742 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 C6orf136Q5SQH8 315 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 NUP54Q7Z3B4 507 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 OR4N5Q8IXE1 308 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 CCDC116Q8IYX3 515 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 MDS2Q8NDY4 140 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.14□□□□□ -0.95
NR1I3-220ENST00000505005 PIWIL2Q8TC59 973 aaKnown RBP9.14□□□□□ -0.95
NR1I3-220ENST00000505005 MIB2Q96AX9 1013 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 CTHRC1Q96CG8 243 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 TMCO6Q96DC7 493 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 SNRNP40Q96DI7 357 aaKnown RBP9.14□□□□□ -0.95
NR1I3-220ENST00000505005 LCORQ96JN0 433 aaPredicted RBP9.14□□□□□ -0.95
NR1I3-220ENST00000505005 RASL10BQ96S79 203 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 HBEGFQ99075 208 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 BARD1Q99728 777 aaKnown RBP9.14□□□□□ -0.95
NR1I3-220ENST00000505005 WWTR1Q9GZV5 400 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 NEUROD4Q9HD90 331 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 QPCTLQ9NXS2 382 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 B4GALT7Q9UBV7 327 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 BCAP29Q9UHQ4 241 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 ZDHHC2Q9UIJ5 367 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 CCL27Q9Y4X3 112 aa9.14□□□□□ -0.95
NR1I3-220ENST00000505005 GOLGA8QA0A0J9YX86 632 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 A0A1B0GUH1 482 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 GOLGA8OA6NCC3 632 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 ASPDHA6ND91 283 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 GOLGA8NF8WBI6 632 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 K7EM74 188 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 PDPK1O15530 556 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 HS6ST1O60243 411 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 OR2J2O76002 312 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 CHRNGP07510 517 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 CREB1P16220 341 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 GPC1P35052 558 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 FEN1P39748 380 aaKnown RBP9.13□□□□□ -0.95
NR1I3-220ENST00000505005 ANXA11P50995 505 aaKnown RBP9.13□□□□□ -0.95
NR1I3-220ENST00000505005 NCBP2P52298 156 aaKnown RBP eCLIP9.13□□□□□ -0.95
NR1I3-220ENST00000505005 EFNA3P52797 238 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 C21orf58P58505 322 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 RAE1P78406 368 aaKnown RBP9.13□□□□□ -0.95
NR1I3-220ENST00000505005 ALDH6A1Q02252 535 aaKnown RBP9.13□□□□□ -0.95
NR1I3-220ENST00000505005 TP53BP2Q13625 1128 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 EBPQ15125 230 aaKnown RBP9.13□□□□□ -0.95
NR1I3-220ENST00000505005 RPS6KA2Q15349 733 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 CYP27C1Q4G0S4 372 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 TCHHL1Q5QJ38 904 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-220ENST00000505005 CPTPQ5TA50 214 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 ANXA8L1Q5VT79 327 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 TMEM198Q66K66 360 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 TMEM81Q6P7N7 255 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 ZCCHC23Q6ZST2 131 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 SLC22A16Q86VW1 577 aa9.13□□□□□ -0.95
NR1I3-220ENST00000505005 TICAM1Q8IUC6 712 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms