RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 AMIGO1Q86WK6 493 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 SLC5A8Q8N695 610 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 ACBD7Q8N6N7 88 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 OR6N2Q8NGY6 317 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 GPR174Q9BXC1 333 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 BEX2Q9BXY8 128 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 CPEB1Q9BZB8 566 aaKnown RBP15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 BEX1Q9HBH7 125 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 KLRF1Q9NZS2 232 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 SUSD2Q9UGT4 822 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 ANHXE9PGG2 379 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 GABRA3P34903 492 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 MAGEA8P43361 318 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 CSNK1DP48730 415 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 BMXP51813 675 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 RPS15AP62244 130 aaKnown RBP15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 GRHL2Q6ISB3 625 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 PNCKQ6P2M8 343 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 MFSD2AQ8NA29 543 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 FRS2Q8WU20 508 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 GATAD2BQ8WXI9 593 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 RHBDF1Q96CC6 855 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 SH2B3Q9UQQ2 575 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 A0A0G2JPF8 293 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 HNRNPCL3B7ZW38 293 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 UGDHO60701 494 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 PTTG1O95997 202 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 HNRNPCL4P0DMR1 293 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 MLIPQ5VWP3 458 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 LRRC25Q8N386 305 aaPredicted RBP15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 OR4K17Q8NGC6 315 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 TFAP2CQ92754 450 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 IL17FQ96PD4 163 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 ACSL6Q9UKU0 697 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 PCDHGA3Q9Y5H0 932 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 H3BMQ9 156 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 AK1P00568 194 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 PRLP01236 227 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 DUSP3P51452 185 aaPredicted RBP15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 GNG2P59768 71 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 KEAP1Q14145 624 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 KCTD18Q6PI47 426 aaPredicted RBP15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 LARP4Q71RC2 724 aaKnown RBP eCLIP15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 ADGRG5Q8IZF4 528 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 PAPD5Q8NDF8 572 aaKnown RBP15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 APIPQ96GX9 242 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 COG8Q96MW5 612 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 DPH7Q9BTV6 452 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 NPLQ9BXD5 320 aaPredicted RBP15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 ZNF304Q9HCX3 659 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 A0A1B0GUL6 1792 aa15.4■□□□□ 0.06
HMGXB3-202ENST00000503427 RBBP9O75884 186 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 PTNP21246 168 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 RPS26P62854 115 aaKnown RBP15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 LRP8Q14114 963 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 CATSPEREQ5SY80 951 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 OR51A7Q8NH64 312 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 TMIGD2Q96BF3 282 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 TMEM19Q96HH6 336 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 SLC30A3Q99726 388 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 CPNE5Q9HCH3 593 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 TREM1Q9NP99 234 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 AGPAT4Q9NRZ5 378 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 TREX1Q9NSU2 369 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 C14orf166Q9Y224 244 aaKnown RBP15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 MAGED1Q9Y5V3 778 aaPredicted RBP15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 HCKP08631 526 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 ITGA5P08648 1049 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 CD40LGP29965 261 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 CD97P48960 835 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 CDK5R2Q13319 367 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 TEX26Q8N6G2 289 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 OR2L8Q8NGY9 312 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 OR56A3Q8NH54 315 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 C16orf78Q8WTQ4 265 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 THAP4Q8WY91 577 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 TTTY10Q9BZA0 68 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 PCDH17O14917 1159 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 PVALBP20472 110 aaPredicted RBP15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 PYCR1P32322 319 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 RAB28P51157 221 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 GPR143P51810 404 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 PDX1P52945 283 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 FOXA1P55317 472 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 VEZF1Q14119 521 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 RGNQ15493 299 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 GTDC1Q4AE62 458 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 OR4C11Q6IEV9 310 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 ZNF852Q6ZMS4 543 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 SPATC1Q76KD6 591 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 PNPLA2Q96AD5 504 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 ECHDC3Q96DC8 303 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 CMKLR1Q99788 373 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 RNF121Q9H920 327 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 PRTFDC1Q9NRG1 225 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 ERVK13-1Q9NX77 482 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 E7EQ34 232 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 ARNTLO00327 626 aa15.39■□□□□ 0.05
HMGXB3-202ENST00000503427 RGS9O75916 674 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms