RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 PSMD12O00232 456 aaPredicted RBP9.08□□□□□ -0.96
SRSF4-205ENST00000497015 CLDN4O14493 209 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 CHST10O43529 356 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 CDC40O60508 579 aaKnown RBP eCLIP9.08□□□□□ -0.96
SRSF4-205ENST00000497015 SLC25A12O75746 678 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 SUPT7LO94864 414 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 STATHP02808 62 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 GLI4P10075 376 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 PCNAP12004 261 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 CD53P19397 219 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 KIR2DL3P43628 341 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 HSD17B7P56937 341 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 RAB8AP61006 207 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 BTN3A2P78410 334 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 NKX6-1P78426 367 aaPredicted RBP9.08□□□□□ -0.96
SRSF4-205ENST00000497015 RHAGQ02094 409 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 IFT88Q13099 833 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 TERF2Q15554 542 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 CPSF6Q16630 551 aaKnown RBP eCLIP9.08□□□□□ -0.96
SRSF4-205ENST00000497015 AP5B1Q2VPB7 878 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 UNC50Q53HI1 259 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 TNFAIP8L3Q5GJ75 292 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 LIPMQ5VYY2 423 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 FRG2Q64ET8 278 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 CXorf67Q86X51 503 aaPredicted RBP9.08□□□□□ -0.96
SRSF4-205ENST00000497015 MYLK4Q86YV6 388 aaPredicted RBP9.08□□□□□ -0.96
SRSF4-205ENST00000497015 ZNF595Q8IYB9 648 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 CA13Q8N1Q1 262 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 KIF2BQ8N4N8 673 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 OR4F6Q8NGB9 312 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 OR2W6PQ8NHA6 318 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 GOT1L1Q8NHS2 421 aaPredicted RBP9.08□□□□□ -0.96
SRSF4-205ENST00000497015 M1APQ8TC57 530 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 PGM2Q96G03 612 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 PEX11GQ96HA9 241 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 FRG2BQ96QU4 278 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 TTYH2Q9BSA4 534 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 TRMOQ9BU70 441 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 STMN4Q9H169 189 aaPredicted RBP9.08□□□□□ -0.96
SRSF4-205ENST00000497015 DEFB127Q9H1M4 99 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 MMP25Q9NPA2 562 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 PRDM7Q9NQW5 492 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 LANCL2Q9NS86 450 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 PNPLA3Q9NST1 481 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 OXSMQ9NWU1 459 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 AHSPQ9NZD4 102 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 HCN3Q9P1Z3 774 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 ADAM29Q9UKF5 820 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 DAPP1Q9UN19 280 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 PLLPQ9Y342 182 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 RNF11Q9Y3C5 154 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 SPACA6W5XKT8 324 aa9.08□□□□□ -0.96
SRSF4-205ENST00000497015 IGKV3D-11A0A0A0MRZ8 115 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 C4orf51C9J302 202 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 RGS16O15492 202 aaPredicted RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 ESRRBO95718 433 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 KRT6AP02538 564 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 KRT6BP04259 564 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 MYZAPP0CAP1 466 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 CPA3P15088 417 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 HIST1H1TP22492 207 aaPredicted RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 ATP5A1P25705 553 aaKnown RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 TPP2P29144 1249 aaPredicted RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 SERPINB5P36952 375 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 ARL1P40616 181 aaPredicted RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 SSR2P43308 183 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 ZFP36L2P47974 494 aaKnown RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 KRT6CP48668 564 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 RNF144AP50876 292 aaPredicted RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 RAP1GDS1P52306 607 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 ZNF844Q08AG5 666 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 GALNT1Q10472 559 aaPredicted RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 CSTF3Q12996 717 aaKnown RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 MPP2Q14168 576 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 DAZAP2Q15038 168 aaPredicted RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 EXT1Q16394 746 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 KRT71Q3SY84 523 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 MINDY4Q4G0A6 757 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 TTC19Q6DKK2 380 aaPredicted RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 OR4C11Q6IEV9 310 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 RNF165Q6ZSG1 346 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 FRMD7Q6ZUT3 714 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 GPRIN3Q6ZVF9 776 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 PAGE2Q7Z2X7 111 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 C4orf33Q8N1A6 199 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 GBP7Q8N8V2 638 aaPredicted RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 OR5T3Q8NGG3 340 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 OR5M9Q8NGP3 310 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 NSUN5Q96P11 429 aaKnown RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 F2RL3Q96RI0 385 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 MTERF1Q99551 399 aaKnown RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 GSTO2Q9H4Y5 243 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 ELOVL6Q9H5J4 265 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 DDX31Q9H8H2 851 aaKnown RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 SEMA4BQ9NPR2 832 aaPredicted RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 LYARQ9NX58 379 aaKnown RBP9.07□□□□□ -0.96
SRSF4-205ENST00000497015 PHF11Q9UIL8 331 aa9.07□□□□□ -0.96
SRSF4-205ENST00000497015 MXRA5Q9NR99 2828 aa9.06□□□□□ -0.96
SRSF4-205ENST00000497015 PHF3Q92576 2039 aaKnown RBP9.06□□□□□ -0.96
SRSF4-205ENST00000497015 TCRBV16S1A1N1A0A5B0 115 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms