RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 CYB561P49447 251 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 HNRNPH2P55795 449 aaKnown RBP8.08□□□□□ -1.12
U2AF1-212ENST00000496462 KCNJ2P63252 427 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 KLF10Q13118 480 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 SNTA1Q13424 505 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 EIPR1Q53HC9 387 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 PDSS1Q5T2R2 415 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 PRAMEF17Q5VTA0 474 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 FAM71E1Q6IPT2 247 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 MTDHQ86UE4 582 aaKnown RBP8.08□□□□□ -1.12
U2AF1-212ENST00000496462 PIAS4Q8N2W9 510 aaPredicted RBP8.08□□□□□ -1.12
U2AF1-212ENST00000496462 GALNT16Q8N428 558 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 SLC15A4Q8N697 577 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 C9orf43Q8TAL5 461 aaPredicted RBP8.08□□□□□ -1.12
U2AF1-212ENST00000496462 SPPL2AQ8TCT8 520 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 SLC35A5Q9BS91 424 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 KRCC1Q9NPI7 259 aaPredicted RBP8.08□□□□□ -1.12
U2AF1-212ENST00000496462 ADPRHL2Q9NX46 363 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 P2RX2Q9UBL9 471 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 DKK4Q9UBT3 224 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 BOKQ9UMX3 212 aaPredicted RBP8.08□□□□□ -1.12
U2AF1-212ENST00000496462 PCDHGA6Q9Y5G7 932 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 USP24Q9UPU5 2620 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 IGKV1-8A0A0C4DH67 115 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 TBX19O60806 448 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 CYP7B1O75881 506 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 CALB2P22676 271 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 VWA5B1Q5TIE3 1220 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 FAM69BQ5VUD6 431 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 BMPERQ8N8U9 685 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.08□□□□□ -1.12
U2AF1-212ENST00000496462 FAM162AQ96A26 154 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 ROPN1LQ96C74 230 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 FBXL20Q96IG2 436 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 SGCZQ96LD1 299 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 ING2Q9H160 280 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 KLF13Q9Y2Y9 288 aaPredicted RBP8.08□□□□□ -1.12
U2AF1-212ENST00000496462 ACOX3O15254 700 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 FOXS1O43638 330 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 C6orf47O95873 294 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 GYS2P54840 703 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 FADDQ13158 208 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 CRTC2Q53ET0 693 aaPredicted RBP8.08□□□□□ -1.12
U2AF1-212ENST00000496462 ANKRD37Q7Z713 158 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 C11orf65Q8NCR3 313 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 FLVCR1-AS1Q8TAF5 88 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 PROX1Q92786 737 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 STMN2Q93045 179 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 ZNF764Q96H86 408 aaPredicted RBP8.08□□□□□ -1.12
U2AF1-212ENST00000496462 SENP5Q96HI0 755 aaPredicted RBP8.08□□□□□ -1.12
U2AF1-212ENST00000496462 SAR1AQ9NR31 198 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 RP1P56715 2156 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 NPIPB8E9PQR5 432 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 CD22P20273 847 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 MAOAP21397 527 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 CCR4P51679 360 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 E2F2Q14209 437 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 SYT16Q17RD7 645 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 XKR7Q5GH72 579 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 SAMD4BQ5PRF9 694 aaKnown RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 PACS2Q86VP3 889 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 ATCAYQ86WG3 371 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 METTL25Q8N6Q8 603 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 SDCCAG3Q96C92 435 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 MARK4Q96L34 752 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 SORT1Q99523 831 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 ACTRT3Q9BYD9 372 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 TOR4AQ9NXH8 423 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 C5AR2Q9P296 337 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 SPIN1Q9Y657 262 aaPredicted RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 A0A1W2PR48 441 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 CDRT15L2A8MXV6 281 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 COX4I1P13073 169 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 MATN1P21941 496 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 ITPKBP27987 946 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 LCN1P31025 176 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 NR0B1P51843 470 aaKnown RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 SLC26A5P58743 744 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 YBX1P67809 324 aaKnown RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 ATP1A4Q13733 1029 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 PTGR1Q14914 329 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 SPANXN4Q5MJ08 99 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 C18orf63Q68DL7 685 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 Q6ZSR9 355 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 TRPM8Q7Z2W7 1104 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 SPACA3Q8IXA5 215 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 OR10A5Q9H207 317 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 EVA1AQ9H8M9 152 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 FANCFQ9NPI8 374 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 SERINC1Q9NRX5 453 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 TEX10Q9NXF1 929 aaPredicted RBP8.07□□□□□ -1.12
U2AF1-212ENST00000496462 TAS2R7Q9NYW3 318 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 ZMIZ1Q9ULJ6 1067 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 SLC9A8Q9Y2E8 581 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 PIKFYVEQ9Y2I7 2098 aa8.07□□□□□ -1.12
U2AF1-212ENST00000496462 A0A1W2PP18 115 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms