RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 GSTO2Q9H4Y5 243 aa14.49□□□□□ -0.09
HDAC4-213ENST00000496347 RUBCNLQ9H714 662 aa14.49□□□□□ -0.09
HDAC4-213ENST00000496347 CES1P1Q9UKY3 287 aa14.49□□□□□ -0.09
HDAC4-213ENST00000496347 CFL2Q9Y281 166 aa14.49□□□□□ -0.09
HDAC4-213ENST00000496347 NINQ8N4C6 2090 aa14.49□□□□□ -0.09
HDAC4-213ENST00000496347 ADAM10O14672 748 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 BCKDKO14874 412 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 PCDH7O60245 1069 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 PROCP04070 461 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 SHBGP04278 402 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 CT62P0C5K7 136 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 KRT15P19012 456 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 PTGER4P35408 488 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 DEKP35659 375 aaKnown RBP14.48□□□□□ -0.09
HDAC4-213ENST00000496347 MAGEA5P43359 124 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 CCT5P48643 541 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 NRG3P56975 720 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 ACSM2AQ08AH3 577 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 ACSM2BQ68CK6 577 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 GALNT18Q6P9A2 607 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 FRMD7Q6ZUT3 714 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 SH2D5Q6ZV89 423 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 SAMD14Q8IZD0 417 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-213ENST00000496347 LRRC25Q8N386 305 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-213ENST00000496347 CHTF18Q8WVB6 975 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 SECISBP2Q96T21 854 aaKnown RBP14.48□□□□□ -0.09
HDAC4-213ENST00000496347 TUBA8Q9NY65 449 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-213ENST00000496347 B4GALT7Q9UBV7 327 aa14.48□□□□□ -0.09
HDAC4-213ENST00000496347 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.48□□□□□ -0.09
HDAC4-213ENST00000496347 CSMD1Q96PZ7 3565 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 NCKAP5O14513 1909 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 A0A1B0GVC2 190 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 SERTM1A2A2V5 107 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 ANKRD33BA6NCL7 494 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 LRRC3CA6NJW4 275 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 FIGNL2A6NMB9 653 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 G3V2L1 256 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 AQP7O14520 342 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 TP53I11O14683 189 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 SUSD5O60279 629 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 CLDN14O95500 239 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 GPX3P22352 226 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 TIA1P31483 386 aaKnown RBP eCLIP14.47□□□□□ -0.09
HDAC4-213ENST00000496347 CRHR1P34998 444 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 PIGAP37287 484 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 SLCO1A2P46721 670 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 DNAJB13P59910 316 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 RPP38P78345 283 aaKnown RBP14.47□□□□□ -0.09
HDAC4-213ENST00000496347 PRICKLE4Q2TBC4 344 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 PRAMEF20Q5VT98 475 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 C3P1Q6ZMU1 363 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 TRILQ7L0X0 811 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 MMP21Q8N119 569 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 CCNYL1Q8N7R7 359 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 EPS8L3Q8TE67 593 aaKnown RBP14.47□□□□□ -0.09
HDAC4-213ENST00000496347 DOK4Q8TEW6 326 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 ADIPOR1Q96A54 375 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 TM4SF18Q96CE8 201 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 ERP27Q96DN0 273 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 ZNF597Q96LX8 424 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 SMC6Q96SB8 1091 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 DOHHQ9BU89 302 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 DEFB127Q9H1M4 99 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 MID1IP1Q9NPA3 183 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 ZFP64Q9NPA5 681 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 QPCTLQ9NXS2 382 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 COQ3Q9NZJ6 369 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 MAT2BQ9NZL9 334 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 EHD3Q9NZN3 535 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 MID2Q9UJV3 735 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 CNOT11Q9UKZ1 510 aaKnown RBP14.47□□□□□ -0.09
HDAC4-213ENST00000496347 ZNF780BQ9Y6R6 833 aa14.47□□□□□ -0.09
HDAC4-213ENST00000496347 ANKHD1Q8IWZ3 2542 aaKnown RBP14.47□□□□□ -0.09
HDAC4-213ENST00000496347 INTS1Q8N201 2190 aaKnown RBP14.46□□□□□ -0.09
HDAC4-213ENST00000496347 GNG14A0A1W2PPG7 69 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 A0A1W2PPM1 405 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 ACOX3O15254 700 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 ZNHIT1O43257 154 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 PLIN3O60664 434 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 HCN1O60741 890 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 ERAL1O75616 437 aaKnown RBP14.46□□□□□ -0.09
HDAC4-213ENST00000496347 PDE9AO76083 593 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 DRD2P14416 443 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 GRNP28799 593 aaKnown RBP14.46□□□□□ -0.09
HDAC4-213ENST00000496347 ALDH9A1P49189 494 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 HTR6P50406 440 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 NR0B1P51843 470 aaKnown RBP14.46□□□□□ -0.09
HDAC4-213ENST00000496347 HMGCS1Q01581 520 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 ZNF763Q0D2J5 394 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 MAP4K2Q12851 820 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 HEPACAMQ14CZ8 416 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 CFAP157Q5JU67 520 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 FAM219BQ5XKK7 198 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 TMEM211Q6ICI0 200 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 ZNF675Q8TD23 568 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 CTHRC1Q96CG8 243 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 C11orf24Q96F05 449 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-213ENST00000496347 CNRIP1Q96F85 164 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-213ENST00000496347 BRINP2Q9C0B6 783 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 GIMAP4Q9NUV9 329 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms