RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 KCNMB4Q86W47 210 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 ZNF444Q8N0Y2 327 aaPredicted RBP3.1□□□□□ -1.91
CLK1-214ENST00000496205 ZCCHC7Q8N3Z6 543 aaKnown RBP3.1□□□□□ -1.91
CLK1-214ENST00000496205 FAM133AQ8N9E0 248 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 STEAP2Q8NFT2 490 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 OR13C2Q8NGS9 318 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 DQX1Q8TE96 717 aaKnown RBP3.1□□□□□ -1.91
CLK1-214ENST00000496205 SLCO2A1Q92959 643 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 MRPL24Q96A35 216 aaKnown RBP3.1□□□□□ -1.91
CLK1-214ENST00000496205 RAB39BQ96DA2 213 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 CCDC51Q96ER9 411 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 RAB40CQ96S21 281 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 FUNDC2Q9BWH2 189 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 ZNF416Q9BWM5 594 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 MED17Q9NVC6 651 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 RBM28Q9NW13 759 aaKnown RBP3.1□□□□□ -1.91
CLK1-214ENST00000496205 AIPL1Q9NZN9 384 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 KLK11Q9UBX7 282 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 ATP6V1HQ9UI12 483 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 MRTO4Q9UKD2 239 aaKnown RBP3.1□□□□□ -1.91
CLK1-214ENST00000496205 PLA2G4CQ9UP65 541 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 MGAT4BQ9UQ53 548 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 ATG4BQ9Y4P1 393 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 WIPI2Q9Y4P8 454 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 ASB3Q9Y575 518 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 KLF2Q9Y5W3 355 aaPredicted RBP3.1□□□□□ -1.91
CLK1-214ENST00000496205 A0A1W2PNU3 283 aaPredicted RBP3.09□□□□□ -1.91
CLK1-214ENST00000496205 XKRY2A2RUG3 117 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 OR5H15A6NDH6 313 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 ZNF724A8MTY0 619 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 ZNF749O43361 778 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 CSDE1O75534 798 aaKnown RBP3.09□□□□□ -1.91
CLK1-214ENST00000496205 IGHG3P01860 377 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 RALAP11233 206 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 ZNF10P21506 573 aaPredicted RBP3.09□□□□□ -1.91
CLK1-214ENST00000496205 FCARP24071 287 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 TRIM23P36406 574 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 ID1P41134 155 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 GEMP55040 296 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 ATP5IP56385 69 aaPredicted RBP3.09□□□□□ -1.91
CLK1-214ENST00000496205 ABCE1P61221 599 aaKnown RBP3.09□□□□□ -1.91
CLK1-214ENST00000496205 RPL27P61353 136 aaKnown RBP3.09□□□□□ -1.91
CLK1-214ENST00000496205 LMO4P61968 165 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 FUT7Q11130 342 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 RIGQ13278 110 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 ZKSCAN8Q15776 578 aaPredicted RBP3.09□□□□□ -1.91
CLK1-214ENST00000496205 IMMTQ16891 758 aaKnown RBP3.09□□□□□ -1.91
CLK1-214ENST00000496205 SLC36A3Q495N2 470 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 NADK2Q4G0N4 442 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 CMPK2Q5EBM0 449 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 LIPJQ5W064 366 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 ZYG11AQ6WRX3 759 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 ZNF730Q6ZMV8 503 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 CHMP1BQ7LBR1 199 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 LRRC70Q7Z2Q7 622 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 CENPLQ8N0S6 344 aaPredicted RBP3.09□□□□□ -1.91
CLK1-214ENST00000496205 ELMOD1Q8N336 334 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 FADS6Q8N9I5 356 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 GANCQ8TET4 914 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 SSC4DQ8WTU2 575 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 RNF139Q8WU17 664 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 RLN3Q8WXF3 142 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 C11orf52Q96A22 123 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 PNPLA2Q96AD5 504 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 ATXN7L3BQ96GX2 97 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 TPD52L3Q96J77 140 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 RPGRIP1Q96KN7 1286 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 ZBTB18Q99592 522 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 SLC26A1Q9H2B4 701 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 GANQ9H2C0 597 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 GORASP2Q9H8Y8 452 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 MTHFD2LQ9H903 347 aaPredicted RBP3.09□□□□□ -1.91
CLK1-214ENST00000496205 MED20Q9H944 212 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 VIPAS39Q9H9C1 493 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 PLEKHA3Q9HB20 300 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 SLC25A19Q9HC21 320 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 VAT1LQ9HCJ6 419 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 BARHL2Q9NY43 387 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 COPS7AQ9UBW8 275 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 IL20RAQ9UHF4 553 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 PCSK1NQ9UHG2 260 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 BAIAP2L1Q9UHR4 511 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 LNPEPQ9UIQ6 1025 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 KIF7Q2M1P5 1343 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 RNF123Q5XPI4 1314 aa3.09□□□□□ -1.91
CLK1-214ENST00000496205 CACNA1FO60840 1977 aa3.09□□□□□ -1.92
CLK1-214ENST00000496205 TRBV5-4A0A0C4DH59 114 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 TNFSF12O43508 249 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 NME2P1O60361 137 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 PRAMEF12O95522 483 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 ADCY5O95622 1261 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 LYNP07948 512 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 FHP07954 510 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 SFTPBP07988 381 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 SERPINF2P08697 491 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 AOC1P19801 751 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 HTR2AP28223 471 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 GDI1P31150 447 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 HSPA1LP34931 641 aa3.08□□□□□ -1.92
CLK1-214ENST00000496205 TSFMP43897 325 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms