RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 LYARQ9NX58 379 aaKnown RBP10.45□□□□□ -0.74
CMSS1-208ENST00000496116 SPHK1Q9NYA1 384 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 REV1Q9UBZ9 1251 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 NDOR1Q9UHB4 597 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 NCKAP1Q9Y2A7 1128 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 ATG2BQ96BY7 2078 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 PRAMEF27A3QJZ7 478 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 C4orf51C9J302 202 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 M0R129 80 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 PGRMC2O15173 223 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 LINC01565O15544 149 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 ZW10O43264 779 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 NME6O75414 186 aaPredicted RBP10.45□□□□□ -0.74
CMSS1-208ENST00000496116 SLITRK5O94991 958 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 PTHP01270 115 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 HMGN2P05204 90 aaKnown RBP10.45□□□□□ -0.74
CMSS1-208ENST00000496116 HOXB3P14651 431 aaPredicted RBP10.45□□□□□ -0.74
CMSS1-208ENST00000496116 GADD45AP24522 165 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 CERS1P27544 350 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 KIAA1024LP59773 190 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 COX10Q12887 443 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 PIN1Q13526 163 aaPredicted RBP10.45□□□□□ -0.74
CMSS1-208ENST00000496116 SHHQ15465 462 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 GPR19Q15760 415 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 INAQ16352 499 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 TRIM16LQ309B1 348 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 TIMM50Q3ZCQ8 353 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 TJAP1Q5JTD0 557 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 SLX4IPQ5VYV7 408 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 PLAG1Q6DJT9 500 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 ZNF425Q6IV72 752 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 PGBD2Q6P3X8 592 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 NLGN4XQ8N0W4 816 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 AMER2Q8N7J2 671 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 OR4D11Q8NGI4 311 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 MCFD2Q8NI22 146 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 SLC7A13Q8TCU3 470 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 ASB12Q8WXK4 309 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 SLC22A18Q96BI1 424 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 CNRIP1Q96F85 164 aaPredicted RBP10.45□□□□□ -0.74
CMSS1-208ENST00000496116 SLC6A17Q9H1V8 727 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 MMP27Q9H306 513 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 KCNK12Q9HB15 430 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 C3orf14Q9HBI5 128 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 SCHIP1Q9P0W5 487 aaPredicted RBP10.45□□□□□ -0.74
CMSS1-208ENST00000496116 A4GNTQ9UNA3 340 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 KLK4Q9Y5K2 254 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 ZNF780BQ9Y6R6 833 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 PMF1-BGLAPU3KQ54 211 aa10.45□□□□□ -0.74
CMSS1-208ENST00000496116 TRANK1O15050 2925 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 MDC1Q14676 2089 aaKnown RBP10.44□□□□□ -0.74
CMSS1-208ENST00000496116 WASHC1A8K0Z3 465 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 M0R3H8 397 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 SCAMP1O15126 338 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 EMC8O43402 210 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 SOX14O95416 240 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 LGI1O95970 557 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 ASGR2P07307 311 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 CHRM5P08912 532 aaPredicted RBP10.44□□□□□ -0.74
CMSS1-208ENST00000496116 HSMCR30P0CW71 290 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 F3P13726 295 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 BUD31P41223 144 aaPredicted RBP10.44□□□□□ -0.74
CMSS1-208ENST00000496116 RGS6P49758 472 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 RAB8AP61006 207 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 RPS15AP62244 130 aaKnown RBP10.44□□□□□ -0.74
CMSS1-208ENST00000496116 ALDH6A1Q02252 535 aaKnown RBP10.44□□□□□ -0.74
CMSS1-208ENST00000496116 MED22Q15528 200 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 ZNF404Q494X3 552 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 GPAT3Q53EU6 434 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 MEDAGQ5VYS4 303 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 ENPP7Q6UWV6 458 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 TMEM107Q6UX40 140 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 WASH2PQ6VEQ5 465 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 MTSS1LQ765P7 747 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 LACC1Q8IV20 430 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 OR4E2Q8NGC2 313 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 OR8J1Q8NGP2 316 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 SNRNP27Q8WVK2 155 aaKnown RBP10.44□□□□□ -0.74
CMSS1-208ENST00000496116 MRPL38Q96DV4 380 aaKnown RBP10.44□□□□□ -0.74
CMSS1-208ENST00000496116 PRRC1Q96M27 445 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 YIPF4Q9BSR8 244 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 PINK1Q9BXM7 581 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 RSPO3Q9BXY4 272 aaPredicted RBP10.44□□□□□ -0.74
CMSS1-208ENST00000496116 NKX2-4Q9H2Z4 354 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 CALML5Q9NZT1 146 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 SLC6A14Q9UN76 642 aa10.44□□□□□ -0.74
CMSS1-208ENST00000496116 PROM1O43490 865 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 ASNA1O43681 348 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 CHRM4P08173 479 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 C8orf89P0DMQ9 161 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 ACADMP11310 421 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 BMP4P12644 408 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 TGFBR1P36897 503 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 FEN1P39748 380 aaKnown RBP10.43□□□□□ -0.74
CMSS1-208ENST00000496116 SLC15A1P46059 708 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 PPP2CBP62714 309 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 PPP2CAP67775 309 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.43□□□□□ -0.742e-7■■■■□ 22.9
CMSS1-208ENST00000496116 RGS1Q08116 209 aa10.43□□□□□ -0.74
CMSS1-208ENST00000496116 HYAL1Q12794 435 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms