RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 TMEM204Q9BSN7 226 aa8.69□□□□□ -1.02
SMARCAL1-213ENST00000496037 KLHL4Q9C0H6 718 aa8.69□□□□□ -1.02
SMARCAL1-213ENST00000496037 OPN3Q9H1Y3 402 aaPredicted RBP8.69□□□□□ -1.02
SMARCAL1-213ENST00000496037 ZNF696Q9H7X3 374 aa8.69□□□□□ -1.02
SMARCAL1-213ENST00000496037 LRRC40Q9H9A6 602 aa8.69□□□□□ -1.02
SMARCAL1-213ENST00000496037 PROK2Q9HC23 129 aa8.69□□□□□ -1.02
SMARCAL1-213ENST00000496037 EML4Q9HC35 981 aaKnown RBP8.69□□□□□ -1.02
SMARCAL1-213ENST00000496037 CATSPERZQ9NTU4 200 aa8.69□□□□□ -1.02
SMARCAL1-213ENST00000496037 ARMCX1Q9P291 453 aa8.69□□□□□ -1.02
SMARCAL1-213ENST00000496037 MRPS33Q9Y291 106 aaKnown RBP8.69□□□□□ -1.02
SMARCAL1-213ENST00000496037 NCKAP5O14513 1909 aa8.69□□□□□ -1.02
SMARCAL1-213ENST00000496037 FREM1Q5H8C1 2179 aa8.69□□□□□ -1.02
SMARCAL1-213ENST00000496037 A0A087X0T9 212 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 MACROD2A1Z1Q3 448 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 FRG2CA6NGY1 282 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 OR1F1O43749 312 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 TRIM3O75382 744 aaPredicted RBP8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 NDUFS3O75489 264 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 PPM1BO75688 479 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 ALX3O95076 343 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 GAS8O95995 478 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 CRHP06850 196 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 FAM228BP0C875 321 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 CPN1P15169 458 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 TNNI3P19429 210 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 KRT20P35900 424 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 SRP14P37108 136 aaKnown RBP8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 HNF4AP41235 474 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 RAB8AP61006 207 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 CCNG2Q16589 344 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 KLHL38Q2WGJ6 581 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 EIPR1Q53HC9 387 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 PIGGQ5H8A4 983 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 OR2A2Q6IF42 318 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 OVCH2Q7RTZ1 564 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 CLNKQ7Z7G1 428 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 WFDC8Q8IUA0 241 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 CDKL3Q8IVW4 592 aaPredicted RBP8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 LRRC56Q8IYG6 542 aaPredicted RBP8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 ZNF321PQ8N8H1 164 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 OR10H5Q8NGA6 315 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 UTP15Q8TED0 518 aaKnown RBP8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 FAM136AQ96C01 138 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 STARD4Q96DR4 205 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 CCDC140Q96MF4 163 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 CENPOQ9BU64 300 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 P2RY12Q9H244 342 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 UBQLN3Q9H347 655 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 EIF2B3Q9NR50 452 aaKnown RBP8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 CLCF1Q9UBD9 225 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 SLC2A6Q9UGQ3 507 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 ADAM30Q9UKF2 790 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 CNOT11Q9UKZ1 510 aaKnown RBP8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 C15orf41Q9Y2V0 281 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 RNF115Q9Y4L5 304 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 CHCHD2Q9Y6H1 151 aaPredicted RBP8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 IKBKGQ9Y6K9 419 aa8.68□□□□□ -1.02
SMARCAL1-213ENST00000496037 A0A087WV62 115 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 SYCE3A1L190 88 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 GOLGA6L6A8MZA4 724 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 C17orf105B2RV13 164 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 H3BML4 177 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 M0R082 166 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 CLOCKO15516 846 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 FTCDO95954 541 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 SERPINC1P01008 464 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 THBDP07204 575 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 DANCRP0C864 163 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 CDH1P12830 882 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 PAMP19021 973 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 TBXA2RP21731 343 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 USF1P22415 310 aaPredicted RBP8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 RPS3P23396 243 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 IMPA1P29218 277 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 MSH2P43246 934 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 SLC6A12P48065 614 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 NAGLUP54802 743 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 KCNJ11Q14654 390 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 KBTBD12Q3ZCT8 623 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 TSTD2Q5T7W7 516 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 ADAM5Q6NVV9 412 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 SEZ6L2Q6UXD5 910 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 C22orf34Q6ZV56 151 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 ADGRE4PQ86SQ3 457 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 SLC15A4Q8N697 577 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 OTUD6BQ8N6M0 293 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 ZNF417Q8TAU3 575 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 NUBPLQ8TB37 319 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 NT5CQ8TCD5 201 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 SLC2A12Q8TD20 617 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 ATL1Q8WXF7 558 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 ZNF845Q96IR2 970 aaPredicted RBP8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 ADAD1Q96M93 576 aaKnown RBP8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 GNRHR2Q96P88 292 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 ZNF587Q96SQ5 575 aaPredicted RBP8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 NTMT1Q9BV86 223 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 MANSC1Q9H8J5 431 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 SH2B3Q9UQQ2 575 aa8.67□□□□□ -1.02
SMARCAL1-213ENST00000496037 FAM157AC9JC47 383 aa8.66□□□□□ -1.02
SMARCAL1-213ENST00000496037 APOC4-APOC2K7ER74 178 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms