RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 FBXL20Q96IG2 436 aa12.24□□□□□ -0.45
ERCC3-209ENST00000494464 ART5Q96L15 291 aa12.24□□□□□ -0.45
ERCC3-209ENST00000494464 OR8D2Q9GZM6 311 aa12.24□□□□□ -0.45
ERCC3-209ENST00000494464 ELOVL6Q9H5J4 265 aa12.24□□□□□ -0.45
ERCC3-209ENST00000494464 ZNF385DQ9H6B1 395 aa12.24□□□□□ -0.45
ERCC3-209ENST00000494464 WDR41Q9HAD4 459 aa12.24□□□□□ -0.45
ERCC3-209ENST00000494464 MEAF6Q9HAF1 191 aa12.24□□□□□ -0.45
ERCC3-209ENST00000494464 BRF2Q9HAW0 419 aa12.24□□□□□ -0.45
ERCC3-209ENST00000494464 TRPS1Q9UHF7 1281 aa12.24□□□□□ -0.45
ERCC3-209ENST00000494464 CROCCQ5TZA2 2017 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 A0A1B0GTL3 188 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 MYOCOSA0A1B0GUC4 107 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 A0A1W2PR48 441 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 SDHDO14521 159 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 UBFD1O14562 309 aaKnown RBP12.23□□□□□ -0.45
ERCC3-209ENST00000494464 DYRK3O43781 588 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 PRKRAO75569 313 aaKnown RBP12.23□□□□□ -0.45
ERCC3-209ENST00000494464 OR2J2O76002 312 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 AIFM1O95831 613 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 IGKV3-11P04433 115 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 KRT16P08779 473 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 ZNF24P17028 368 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 TNNI3P19429 210 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 CA7P43166 264 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 CDH13P55290 713 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 RNF4P78317 190 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 ELF3P78545 371 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-209ENST00000494464 CLCQ05315 142 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 KRTCAP3Q53RY4 240 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 C1QL3Q5VWW1 255 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 OR52E8Q6IFG1 317 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 RPS27LQ71UM5 84 aaKnown RBP12.23□□□□□ -0.45
ERCC3-209ENST00000494464 PAGE2Q7Z2X7 111 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 MAMDC2Q7Z304 686 aaPredicted RBP12.23□□□□□ -0.45
ERCC3-209ENST00000494464 ZNF321PQ8N8H1 164 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 OR5L2Q8NGL0 311 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 NUBPLQ8TB37 319 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 ACTRT2Q8TDY3 377 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 ASB15Q8WXK1 588 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 RBM18Q96H35 190 aaKnown RBP12.23□□□□□ -0.45
ERCC3-209ENST00000494464 OR52B2Q96RD2 323 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 RASL10BQ96S79 203 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 ZNF382Q96SR6 550 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 BTBD10Q9BSF8 475 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 NUF2Q9BZD4 464 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 RYDENQ9NUL5 291 aaKnown RBP12.23□□□□□ -0.45
ERCC3-209ENST00000494464 AHSPQ9NZD4 102 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 ZNF225Q9UK10 706 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 SNX6Q9UNH7 406 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 STK38LQ9Y2H1 464 aa12.23□□□□□ -0.45
ERCC3-209ENST00000494464 UTP20O75691 2785 aaKnown RBP12.23□□□□□ -0.45
ERCC3-209ENST00000494464 GOLGA8QA0A0J9YX86 632 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 A1L4Q6 167 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 GOLGA8OA6NCC3 632 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 A8MVJ9 347 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 TMEM233B4DJY2 109 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 GOLGA8NF8WBI6 632 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 KLRC4-KLRK1H3BQV0 150 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 PPP6CO00743 305 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 MGRN1O60291 552 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 GPR75O95800 540 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 CLDN1O95832 211 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 ENO1P06733 434 aaKnown RBP12.22□□□□□ -0.45
ERCC3-209ENST00000494464 GALNSP34059 522 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 MNAT1P51948 309 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 SRSF11Q05519 484 aaKnown RBP12.22□□□□□ -0.45
ERCC3-209ENST00000494464 BTKQ06187 659 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 RIPK1Q13546 671 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 PDCD2Q16342 344 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-209ENST00000494464 LSM12Q3MHD2 195 aaKnown RBP12.22□□□□□ -0.45
ERCC3-209ENST00000494464 DNAL1Q4LDG9 190 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 KANK2Q63ZY3 851 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 FJX1Q86VR8 437 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 OR4N5Q8IXE1 308 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 CLYBLQ8N0X4 340 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 METTL4Q8N3J2 472 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 PSD4Q8NDX1 1056 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 AGAP11Q8TF27 550 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 UTP4Q969X6 686 aaKnown RBP12.22□□□□□ -0.45
ERCC3-209ENST00000494464 MTFMTQ96DP5 389 aaKnown RBP12.22□□□□□ -0.45
ERCC3-209ENST00000494464 CMTM5Q96DZ9 223 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 SHCBP1LQ9BZQ2 653 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 C1orf21Q9H246 121 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 MMADHCQ9H3L0 296 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-209ENST00000494464 TIMMDC1Q9NPL8 285 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.22□□□□□ -0.45
ERCC3-209ENST00000494464 HPF1Q9NWY4 346 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 TEX10Q9NXF1 929 aaPredicted RBP12.22□□□□□ -0.45
ERCC3-209ENST00000494464 TRAF6Q9Y4K3 522 aa12.22□□□□□ -0.45
ERCC3-209ENST00000494464 E9PBE3 544 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 WWP2O00308 870 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 SLC19A2O60779 497 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 OR6B1O95007 311 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 OR4F21O95013 312 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 PDYNP01213 254 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 GBAP04062 536 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 JUNP05412 331 aaKnown RBP12.21□□□□□ -0.45
ERCC3-209ENST00000494464 HSD3B1P14060 373 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 TSPAN8P19075 237 aa12.21□□□□□ -0.45
ERCC3-209ENST00000494464 HSD3B2P26439 372 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms