RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 REPIN1Q9BWE0 567 aaKnown RBP11.61□□□□□ -0.55
SNX17-208ENST00000493711 NDE1Q9NXR1 346 aa11.61□□□□□ -0.55
SNX17-208ENST00000493711 NTMQ9P121 344 aa11.61□□□□□ -0.55
SNX17-208ENST00000493711 HS3ST3B1Q9Y662 390 aa11.61□□□□□ -0.55
SNX17-208ENST00000493711 LOC400499M0QZD8 3231 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 MDC1Q14676 2089 aaKnown RBP11.6□□□□□ -0.55
SNX17-208ENST00000493711 IGHV1-45A0A0A0MS14 117 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 NSG1A0A0A6YYJ2 146 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 OR2W5A6NFC9 320 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 OR6C76A6NM76 312 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 C9JVG2 144 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 EBAG9O00559 213 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 SOCS6O14544 535 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 MRASO14807 208 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 KLK10O43240 276 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 EMC8O43402 210 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 HNRNPCL1O60812 293 aaKnown RBP11.6□□□□□ -0.55
SNX17-208ENST00000493711 COQ9O75208 318 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 C6orf47O95873 294 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 HPP00738 406 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 KRT16P08779 473 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 ESRRAP11474 423 aaPredicted RBP11.6□□□□□ -0.55
SNX17-208ENST00000493711 UQCRC2P22695 453 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 OTX2P32243 289 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 ANXA11P50995 505 aaKnown RBP11.6□□□□□ -0.55
SNX17-208ENST00000493711 RRADP55042 308 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 RPS18P62269 152 aaKnown RBP11.6□□□□□ -0.55
SNX17-208ENST00000493711 PSPHP78330 225 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 FUT7Q11130 342 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 HSPB3Q12988 150 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 ZNF267Q14586 743 aaPredicted RBP11.6□□□□□ -0.55
SNX17-208ENST00000493711 PRSS53Q2L4Q9 553 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 PRICKLE4Q2TBC4 344 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 ZNF750Q32MQ0 723 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 ZNF628Q5EBL2 1059 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 PAPD4Q6PIY7 484 aaKnown RBP11.6□□□□□ -0.55
SNX17-208ENST00000493711 KIRREL2Q6UWL6 708 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 LRRC69Q6ZNQ3 347 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 LANCL3Q6ZV70 420 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 ZNF551Q7Z340 670 aaPredicted RBP11.6□□□□□ -0.55
SNX17-208ENST00000493711 MRGPREQ86SM8 312 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 TREML1Q86YW5 311 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 SHISA5Q8N114 240 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 OR2L13Q8N349 312 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 B3GNT7Q8NFL0 401 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 OR11G2Q8NGC1 345 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 OR9A2Q8NGT5 310 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 M1APQ8TC57 530 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 PPWD1Q96BP3 646 aaKnown RBP11.6□□□□□ -0.55
SNX17-208ENST00000493711 CTHRC1Q96CG8 243 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 ELP4Q96EB1 424 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 SENP5Q96HI0 755 aaPredicted RBP11.6□□□□□ -0.55
SNX17-208ENST00000493711 NSL1Q96IY1 281 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 FER1L6-AS2Q96M78 137 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 SH3GL1Q99961 368 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 RAD21L1Q9H4I0 556 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 SLAMF7Q9NQ25 335 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 DDX18Q9NVP1 670 aaKnown RBP11.6□□□□□ -0.55
SNX17-208ENST00000493711 MAT2BQ9NZL9 334 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.6□□□□□ -0.55
SNX17-208ENST00000493711 IL17BQ9UHF5 180 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 C19orf53Q9UNZ5 99 aaPredicted RBP11.6□□□□□ -0.55
SNX17-208ENST00000493711 CORO2BQ9UQ03 480 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 AP3M1Q9Y2T2 418 aa11.6□□□□□ -0.55
SNX17-208ENST00000493711 SMG1Q96Q15 3661 aaKnown RBP11.59□□□□□ -0.55
SNX17-208ENST00000493711 C15orf38-AP3S2A0A0A6YYH1 394 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 TLX3O43711 291 aaPredicted RBP11.59□□□□□ -0.55
SNX17-208ENST00000493711 PRAMEF2O60811 474 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 ATP5HO75947 161 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 CPSF4O95639 269 aaKnown RBP11.59□□□□□ -0.55
SNX17-208ENST00000493711 KRT75O95678 551 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 CALB2P22676 271 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 EIF2S3P41091 472 aaKnown RBP11.59□□□□□ -0.55
SNX17-208ENST00000493711 CCT3P49368 545 aaKnown RBP11.59□□□□□ -0.55
SNX17-208ENST00000493711 PGDP52209 483 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 HBA1P69905 142 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 MGAT2Q10469 447 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 ART3Q13508 389 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 NFYCQ13952 458 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 PCOLCEQ15113 449 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 TRMT5Q32P41 509 aaKnown RBP11.59□□□□□ -0.55
SNX17-208ENST00000493711 LRIF1Q5T3J3 769 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 PLAG1Q6DJT9 500 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 ZCCHC12Q6PEW1 402 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 HACD2Q6Y1H2 254 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 ZNF621Q6ZSS3 439 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 ARPINQ7Z6K5 226 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 VASH2Q86V25 355 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 ANKRD46Q86W74 232 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 CLECL1Q8IZS7 167 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 OR1N1Q8NGS0 311 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 OR8K3Q8NH51 312 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 SLC2A12Q8TD20 617 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 ADAMTS17Q8TE56 1095 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 NUDT8Q8WV74 236 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 VMP1Q96GC9 406 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 CNPPD1Q9BV87 410 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 TMUB1Q9BVT8 246 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 SERHLQ9NQF3 203 aa11.59□□□□□ -0.55
SNX17-208ENST00000493711 P4HTMQ9NXG6 502 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms