RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 SNX4O95219 450 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 CLDN9O95484 217 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 EPPINO95925 133 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 PIK3R1P27986 724 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 TYK2P29597 1187 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 MASP1P48740 699 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 ASCL1P50553 236 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 WNT3P56703 355 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 FBXW4P57775 412 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 CRYZQ08257 329 aaKnown RBP9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 PCBP2Q15366 365 aaKnown RBP eCLIP9.41□□□□□ -0.92e-12■■■□□ 16
NUDCD3-210ENST00000493613 CEBPEQ15744 281 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 ACSF3Q4G176 576 aaPredicted RBP9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 FLYWCH1Q4VC44 716 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 BICRALQ6AI39 1079 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 PACS2Q86VP3 889 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 LACC1Q8IV20 430 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 GALNT12Q8IXK2 581 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 PM20D2Q8IYS1 436 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 ZNF441Q8N8Z8 693 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 CHDHQ8NE62 594 aaPredicted RBP9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 WDR20Q8TBZ3 569 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 ATP6V1E2Q96A05 226 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 HSPBAP1Q96EW2 488 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 GPR78Q96P69 363 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 TIMP4Q99727 224 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 TMUB1Q9BVT8 246 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 VPS11Q9H270 941 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 CXXC4Q9H2H0 198 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 NOL11Q9H8H0 719 aaKnown RBP9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 CXorf21Q9HAI6 301 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 RASSF1Q9NS23 344 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 TEX10Q9NXF1 929 aaPredicted RBP9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 PSD3Q9NYI0 1048 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 TNPO3Q9Y5L0 923 aaKnown RBP9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 NPFFR2Q9Y5X5 522 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 A6NNC1 897 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 FOXE1O00358 373 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 SEMA3DO95025 777 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 ACSL3O95573 720 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 IL2RAP01589 272 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 ALDOAP04075 364 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 HPNP05981 417 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 CT62P0C5K7 136 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 CEACAM8P31997 349 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 PHBP35232 272 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 TIMP3P35625 211 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 CASP3P42574 277 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 SERPINB8P50452 374 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 NRG3P56975 720 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 ETF1P62495 437 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 PPP2R2AP63151 447 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 RPP38P78345 283 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 FUT7Q11130 342 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 TOMM20Q15388 145 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 SF3B4Q15427 424 aaKnown RBP eCLIP9.4□□□□□ -0.97e-8■■■□□ 16.6
NUDCD3-210ENST00000493613 SGO1Q5FBB7 561 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 C6orf163Q5TEZ5 329 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 FNDC7Q5VTL7 733 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 TGIF2LYQ8IUE0 185 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 PRR22Q8IZ63 422 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 PLD6Q8N2A8 252 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 ZNF615Q8N8J6 731 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 PTGR2Q8N8N7 351 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 L3MBTL4Q8NA19 623 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 OR4K14Q8NGD5 310 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 OR52B6Q8NGF0 335 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 GOT1L1Q8NHS2 421 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 SPPL2AQ8TCT8 520 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 RNASE6Q93091 150 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 PHF21BQ96EK2 531 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 GNRHR2Q96P88 292 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 SECISBP2Q96T21 854 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 SERPINI1Q99574 410 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 ANGPTL4Q9BY76 406 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 PRDM14Q9GZV8 571 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 OR10A5Q9H207 317 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 UBQLN3Q9H347 655 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 ZNF629Q9UEG4 869 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 MTRF1LQ9UGC7 380 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 CBLCQ9ULV8 474 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 EDARQ9UNE0 448 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 CAMK2AQ9UQM7 478 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 C15orf41Q9Y2V0 281 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 SLC6A5Q9Y345 797 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 IKBKGQ9Y6K9 419 aa9.4□□□□□ -0.9
NUDCD3-210ENST00000493613 MED12Q93074 2177 aa9.4□□□□□ -0.91
NUDCD3-210ENST00000493613 KIF2AO00139 706 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-210ENST00000493613 OR7A17O14581 309 aa9.39□□□□□ -0.91
NUDCD3-210ENST00000493613 KLK1P06870 262 aa9.39□□□□□ -0.91
NUDCD3-210ENST00000493613 KRT15P19012 456 aa9.39□□□□□ -0.91
NUDCD3-210ENST00000493613 KLK2P20151 261 aa9.39□□□□□ -0.91
NUDCD3-210ENST00000493613 DNASE1P24855 282 aa9.39□□□□□ -0.91
NUDCD3-210ENST00000493613 TACR1P25103 407 aa9.39□□□□□ -0.91
NUDCD3-210ENST00000493613 ABCD3P28288 659 aa9.39□□□□□ -0.91
NUDCD3-210ENST00000493613 CDK9P50750 372 aaKnown RBP9.39□□□□□ -0.91
NUDCD3-210ENST00000493613 XKP51811 444 aa9.39□□□□□ -0.91
NUDCD3-210ENST00000493613 CCNG1P51959 295 aa9.39□□□□□ -0.91
NUDCD3-210ENST00000493613 ZNF136P52737 540 aa9.39□□□□□ -0.91
NUDCD3-210ENST00000493613 KRTAP21-3Q3LHN1 58 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms