RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TIGD3Q6B0B8 471 aa16.11■□□□□ 0.17
NUP50-218ENST00000493456 YTHDF3Q7Z739 585 aaKnown RBP16.11■□□□□ 0.17
NUP50-218ENST00000493456 FAM83FQ8NEG4 500 aaPredicted RBP16.11■□□□□ 0.17
NUP50-218ENST00000493456 OR7G3Q8NG95 312 aa16.11■□□□□ 0.17
NUP50-218ENST00000493456 ACTRT1Q8TDG2 376 aa16.11■□□□□ 0.17
NUP50-218ENST00000493456 RGMAQ96B86 450 aa16.11■□□□□ 0.17
NUP50-218ENST00000493456 UCN2Q96RP3 112 aa16.11■□□□□ 0.17
NUP50-218ENST00000493456 SORBS1Q9BX66 1292 aaKnown RBP16.11■□□□□ 0.17
NUP50-218ENST00000493456 OR51B5Q9H339 312 aa16.11■□□□□ 0.17
NUP50-218ENST00000493456 CD274Q9NZQ7 290 aa16.11■□□□□ 0.17
NUP50-218ENST00000493456 SMAD7O15105 426 aaKnown RBP16.1■□□□□ 0.17
NUP50-218ENST00000493456 PRKRAO75569 313 aaKnown RBP16.1■□□□□ 0.17
NUP50-218ENST00000493456 S100BP04271 92 aaPredicted RBP16.1■□□□□ 0.17
NUP50-218ENST00000493456 PTPN6P29350 595 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 SLCO1A2P46721 670 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 HNRNPH2P55795 449 aaKnown RBP16.1■□□□□ 0.17
NUP50-218ENST00000493456 ATP6V0D1P61421 351 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 GAB1Q13480 694 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 SETDB1Q15047 1291 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 TMEM64Q6YI46 380 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 ADGRE4PQ86SQ3 457 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 C17orf47Q8NEP4 570 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 OR1J4Q8NGS1 313 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 DOK4Q8TEW6 326 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 WNT2BQ93097 391 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 TSPAN17Q96FV3 270 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 CCL19Q99731 98 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 TUBA1CQ9BQE3 449 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 MCMBPQ9BTE3 642 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 CD244Q9BZW8 370 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 LYARQ9NX58 379 aaKnown RBP16.1■□□□□ 0.17
NUP50-218ENST00000493456 MOCS1Q9NZB8 636 aa16.1■□□□□ 0.17
NUP50-218ENST00000493456 ANK3Q12955 4377 aaKnown RBP16.09■□□□□ 0.17
NUP50-218ENST00000493456 INAFM1C9JVW0 142 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 H0Y3Z8 333 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 PLPP1O14494 284 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 SLC35E2BP0CK96 405 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 SLC35E2P0CK97 266 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 CCDC166P0CW27 439 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 NR2F6P10588 404 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 CD1DP15813 335 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 CHMP24386 653 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 PIK3CBP42338 1070 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 PCYT1AP49585 367 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 ARL4CP56559 192 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 OR4D1Q15615 310 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 TMEM81Q6P7N7 255 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 ENPP6Q6UWR7 440 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 SPATA6LQ8N4H0 392 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 WDR41Q9HAD4 459 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 PACSIN3Q9UKS6 424 aa16.09■□□□□ 0.17
NUP50-218ENST00000493456 ARID1AO14497 2285 aa16.08■□□□□ 0.17
NUP50-218ENST00000493456 A8MXE2 369 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 GNB5O14775 395 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 CTIFO43310 598 aaKnown RBP16.08■□□□□ 0.16
NUP50-218ENST00000493456 RHOXF2BP0C7M4 288 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 KRT15P19012 456 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 IVDP26440 423 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 SSTR4P31391 388 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 SOX18P35713 384 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 RPS13P62277 151 aaKnown RBP16.08■□□□□ 0.16
NUP50-218ENST00000493456 ACKR1Q16570 336 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 GRHL2Q6ISB3 625 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 C20orf204Q6ZNR8 217 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 YRDCQ86U90 279 aaKnown RBP16.08■□□□□ 0.16
NUP50-218ENST00000493456 GALNT12Q8IXK2 581 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 SLC44A1Q8WWI5 657 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 UCN3Q969E3 161 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 ADIPOR1Q96A54 375 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 INTS12Q96CB8 462 aaKnown RBP16.08■□□□□ 0.16
NUP50-218ENST00000493456 METTL7AQ9H8H3 244 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 CXorf21Q9HAI6 301 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 ZNF226Q9NYT6 803 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 C6orf203Q9P0P8 240 aaPredicted RBP16.08■□□□□ 0.16
NUP50-218ENST00000493456 CLCF1Q9UBD9 225 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 RNF112Q9ULX5 631 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 TSC22D4Q9Y3Q8 395 aa16.08■□□□□ 0.16
NUP50-218ENST00000493456 TRIM64A6NGJ6 449 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 TRIM64BA6NI03 449 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 ABCD3P28288 659 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 CPOXP36551 454 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 MC3RP41968 323 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 FUT7Q11130 342 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 DDX39BQ13838 428 aaKnown RBP16.07■□□□□ 0.16
NUP50-218ENST00000493456 MRM1Q6IN84 353 aaKnown RBP16.07■□□□□ 0.16
NUP50-218ENST00000493456 SLC30A6Q6NXT4 461 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 ANGPTL8Q6UXH0 198 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 ANKMY2Q8IV38 441 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 HUS1BQ8NHY5 278 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 PERPQ96FX8 193 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 DDX47Q9H0S4 455 aaKnown RBP16.07■□□□□ 0.16
NUP50-218ENST00000493456 OR10A5Q9H207 317 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 UBTD1Q9HAC8 227 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 NUDT4Q9NZJ9 180 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 ASB4Q9Y574 426 aa16.07■□□□□ 0.16
NUP50-218ENST00000493456 EXPH5Q8NEV8 1989 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 A0A0A6YYD5 115 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 A0A1W2PR48 441 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 GLOD5A6NK44 160 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 DEFB108AA8MXU0 73 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms