RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ZSCAN1Q8NBB4 408 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 SNRNP27Q8WVK2 155 aaKnown RBP16.04■□□□□ 0.16
LIME1-208ENST00000493265 OR5P2Q8WZ92 322 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 LPAR4Q99677 370 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 INPP5KQ9BT40 448 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 ZNF700Q9H0M5 742 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 ANKRA2Q9H9E1 313 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 CXorf21Q9HAI6 301 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 ACSS1Q9NUB1 689 aaPredicted RBP16.04■□□□□ 0.16
LIME1-208ENST00000493265 MRGBPQ9NV56 204 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 FAM120CQ9NX05 1096 aaKnown RBP16.04■□□□□ 0.16
LIME1-208ENST00000493265 PCDHGB4Q9UN71 923 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 ERVK-19Q9WJR5 959 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 SSUH2Q9Y2M2 353 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 LOC102723996A0A087X1L8 192 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 SAGE2PA6NJ88 616 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 RNASET2O00584 256 aaKnown RBP16.03■□□□□ 0.16
LIME1-208ENST00000493265 ANGPT2O15123 496 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 GSNP06396 782 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 MC3RP41968 323 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 EXOSC7Q15024 291 aaKnown RBP16.03■□□□□ 0.16
LIME1-208ENST00000493265 MAPRE2Q15555 327 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 CEBPEQ15744 281 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 PRICKLE4Q2TBC4 344 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 BTBD16Q32M84 506 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 SPDYE7PQ495Y7 208 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 NDUFAF7Q7L592 441 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 CLEC4FQ8N1N0 589 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 VWA5B2Q8N398 1253 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 NATD1Q8N6N6 113 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 ZNF321PQ8N8H1 164 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 C7orf57Q8NEG2 295 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 OR14A16Q8NHC5 309 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 ADAMTS17Q8TE56 1095 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 DAZLQ92904 295 aaKnown RBP16.03■□□□□ 0.16
LIME1-208ENST00000493265 VPS50Q96JG6 964 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 WDR77Q9BQA1 342 aaPredicted RBP16.03■□□□□ 0.16
LIME1-208ENST00000493265 RMND5AQ9H871 391 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 TMEM45AQ9NWC5 275 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 MAT2BQ9NZL9 334 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 BCAP29Q9UHQ4 241 aa16.03■□□□□ 0.16
LIME1-208ENST00000493265 PCSK5Q92824 1860 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 ASPDHA6ND91 283 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 SYNDIG1LA6NDD5 238 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 ARGFXA6NJG6 315 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 CYSRT1A8MQ03 144 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 PCDH17O14917 1159 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 SLC28A2O43868 658 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 ANP32DO95626 131 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 CELA2AP08217 269 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 COX4I1P13073 169 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 ADSLP30566 484 aaPredicted RBP16.02■□□□□ 0.16
LIME1-208ENST00000493265 SSTR4P31391 388 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 FRKP42685 505 aaPredicted RBP16.02■□□□□ 0.16
LIME1-208ENST00000493265 PRKAG1P54619 331 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 HBA1P69905 142 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 MGAT2Q10469 447 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 CDC20Q12834 499 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 CYLC2Q14093 348 aaPredicted RBP16.02■□□□□ 0.16
LIME1-208ENST00000493265 MMEL1Q495T6 779 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 TRMT12Q53H54 448 aaKnown RBP16.02■□□□□ 0.16
LIME1-208ENST00000493265 ZNF628Q5EBL2 1059 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 CPZQ66K79 652 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 FITM2Q8N6M3 262 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 SIMC1Q8NDZ2 872 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 OR7G2Q8NG99 324 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 OR5AK3PQ8NH89 298 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 SLC2A12Q8TD20 617 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 NCLNQ969V3 563 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 SENP5Q96HI0 755 aaPredicted RBP16.02■□□□□ 0.16
LIME1-208ENST00000493265 ITCHQ96J02 903 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 PANX1Q96RD7 426 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 SLC25A23Q9BV35 468 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 CXorf36Q9H7Y0 433 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 IL1RL2Q9HB29 575 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 NDUFAF1Q9Y375 327 aa16.02■□□□□ 0.16
LIME1-208ENST00000493265 A0A1W2PP18 115 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 RFXANKO14593 260 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 SLC22A2O15244 555 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 SCN2BO60939 215 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 NME6O75414 186 aaPredicted RBP16.01■□□□□ 0.15
LIME1-208ENST00000493265 DDAH2O95865 285 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 HPP00738 406 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 CDKN2CP42773 168 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 SLC26A5P58743 744 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 MAP4K2Q12851 820 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 CHAF1BQ13112 559 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 TLR1Q15399 786 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 DEFB109BQ30KR1 87 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 PAGE3Q5JUK9 113 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 ZNF621Q6ZSS3 439 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 PRICKLE2Q7Z3G6 844 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 B3GNT7Q8NFL0 401 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 ELP4Q96EB1 424 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 CCDC115Q96NT0 180 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 IP6K3Q96PC2 410 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 NPAS2Q99743 824 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 TUBB6Q9BUF5 446 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 NUDT9Q9BW91 350 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 SLC52A3Q9NQ40 469 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms