RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 RGMAQ96B86 450 aa12.72□□□□□ -0.37
VARS-227ENST00000489979 INTS12Q96CB8 462 aaKnown RBP12.72□□□□□ -0.37
VARS-227ENST00000489979 NTNG2Q96CW9 530 aa12.72□□□□□ -0.37
VARS-227ENST00000489979 PERPQ96FX8 193 aa12.72□□□□□ -0.37
VARS-227ENST00000489979 ZFP3Q96NJ6 502 aa12.72□□□□□ -0.37
VARS-227ENST00000489979 TM9SF2Q99805 663 aa12.72□□□□□ -0.37
VARS-227ENST00000489979 RHOJQ9H4E5 214 aa12.72□□□□□ -0.37
VARS-227ENST00000489979 TRPS1Q9UHF7 1281 aa12.72□□□□□ -0.37
VARS-227ENST00000489979 ADAM21Q9UKJ8 722 aa12.72□□□□□ -0.37
VARS-227ENST00000489979 TESMINQ9Y4I5 508 aa12.72□□□□□ -0.37
VARS-227ENST00000489979 HEATR5AQ86XA9 2040 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 GOLGA6L10A0A0M3HER8 536 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 GLOD5A6NK44 160 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 A8MXE2 369 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 PLPP1O14494 284 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 SIAH2O43255 324 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 ACTL6AO96019 429 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 CCDC166P0CW27 439 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 CD1DP15813 335 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 IVDP26440 423 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 SERPINB1P30740 379 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 TMED10P49755 219 aaKnown RBP12.71□□□□□ -0.37
VARS-227ENST00000489979 SLC12A2P55011 1212 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 NRG3P56975 720 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 RPP38P78345 283 aaKnown RBP12.71□□□□□ -0.37
VARS-227ENST00000489979 SRYQ05066 204 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 PCDH1Q08174 1060 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 DDX39BQ13838 428 aaKnown RBP12.71□□□□□ -0.37
VARS-227ENST00000489979 SETDB1Q15047 1291 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 LRRC70Q7Z2Q7 622 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 GAS2L3Q86XJ1 694 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 PRR22Q8IZ63 422 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 GCNT2Q8N0V5 402 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 ZCCHC7Q8N3Z6 543 aaKnown RBP12.71□□□□□ -0.37
VARS-227ENST00000489979 OR1J4Q8NGS1 313 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 EXT2Q93063 718 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 UCN3Q969E3 161 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 LRRC39Q96DD0 335 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 CCL19Q99731 98 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 CD244Q9BZW8 370 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 CAB39LQ9H9S4 337 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 UBTD1Q9HAC8 227 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 FETUBQ9UGM5 382 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 MTO1Q9Y2Z2 717 aaKnown RBP12.71□□□□□ -0.37
VARS-227ENST00000489979 JRKLQ9Y4A0 524 aa12.71□□□□□ -0.37
VARS-227ENST00000489979 STAB1Q9NY15 2570 aa12.71□□□□□ -0.38
VARS-227ENST00000489979 A0A1W2PR48 441 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 DEFB108AA8MXU0 73 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 H0Y3Z8 333 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 PHGDHO43175 533 aaKnown RBP12.7□□□□□ -0.38
VARS-227ENST00000489979 CTIFO43310 598 aaKnown RBP12.7□□□□□ -0.38
VARS-227ENST00000489979 PIAS1O75925 651 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 S100BP04271 92 aaPredicted RBP12.7□□□□□ -0.38
VARS-227ENST00000489979 SLC35E2BP0CK96 405 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 SLC35E2P0CK97 266 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 NR2F6P10588 404 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 CPN1P15169 458 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 FPR1P21462 350 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 GALNSP34059 522 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 GCKP35557 465 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 CPOXP36551 454 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 DIO3P55073 304 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 POU4F1Q01851 419 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 MORF4L2Q15014 288 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 ACKR1Q16570 336 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 MRM1Q6IN84 353 aaKnown RBP12.7□□□□□ -0.38
VARS-227ENST00000489979 ANGPTL8Q6UXH0 198 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 ADGRE4PQ86SQ3 457 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 HUS1BQ8NHY5 278 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 ACTRT1Q8TDG2 376 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 WNT2BQ93097 391 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 ADIPOR1Q96A54 375 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 CENPKQ9BS16 269 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 MCMBPQ9BTE3 642 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 DDX47Q9H0S4 455 aaKnown RBP12.7□□□□□ -0.38
VARS-227ENST00000489979 PIGMQ9H3S5 423 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 METTL7AQ9H8H3 244 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 CXorf21Q9HAI6 301 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 MOCS1Q9NZB8 636 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 PACSIN3Q9UKS6 424 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 ASB4Q9Y574 426 aa12.7□□□□□ -0.38
VARS-227ENST00000489979 CHD3Q12873 2000 aaKnown RBP12.69□□□□□ -0.38
VARS-227ENST00000489979 A0A1W2PS29 197 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 C2orf72A6NCS6 295 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 SNPHO15079 494 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 TMPRSS11DO60235 418 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 EEDO75530 441 aaKnown RBP12.69□□□□□ -0.38
VARS-227ENST00000489979 CT62P0C5K7 136 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 KRT15P19012 456 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 ABCD3P28288 659 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 ARL4CP56559 192 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 ATP6V0D1P61421 351 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 RPS13P62277 151 aaKnown RBP12.69□□□□□ -0.38
VARS-227ENST00000489979 FAM27E3Q08E93 113 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 FASTKD3Q14CZ7 662 aaKnown RBP12.69□□□□□ -0.38
VARS-227ENST00000489979 DESI1Q6ICB0 168 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 ZNF615Q8N8J6 731 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 PIK3IP1Q96FE7 263 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 WFIKKN1Q96NZ8 548 aa12.69□□□□□ -0.38
VARS-227ENST00000489979 UCN2Q96RP3 112 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms