RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ERAL1O75616 437 aaKnown RBP21.16■□□□□ 0.98
COL9A3-213ENST00000489045 KRT6AP02538 564 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 KRT6BP04259 564 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 PYGBP11216 843 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 IMPDH1P20839 514 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 DEKP35659 375 aaKnown RBP21.16■□□□□ 0.98
COL9A3-213ENST00000489045 KRT6CP48668 564 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 MAN2A2P49641 1150 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 SLC10A1Q14973 349 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 GPRIN3Q6ZVF9 776 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 MZB1Q8WU39 189 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 LDAHQ9H6V9 325 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 ZFP64Q9NPA5 681 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 VPS29Q9UBQ0 182 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 GOLGA6L10A6NI86 522 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 AQP7O14520 342 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 BCKDKO14874 412 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 SUSD5O60279 629 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 GSTA1P08263 222 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 RFPL3SP0C7P2 107 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 HSD3B1P14060 373 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 HSD3B2P26439 372 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 HMOX2P30519 316 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 FEN1P39748 380 aaKnown RBP21.15■□□□□ 0.98
COL9A3-213ENST00000489045 PRKAA2P54646 552 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 CSTF3Q12996 717 aaKnown RBP21.15■□□□□ 0.98
COL9A3-213ENST00000489045 RPS6KA2Q15349 733 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 ZNF585AQ6P3V2 769 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 SLC22A9Q8IVM8 553 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 OR7G1Q8NGA0 311 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 ASB5Q8WWX0 329 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 RND1Q92730 232 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 ADIPOR1Q96A54 375 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 KLHL29Q96CT2 875 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 L3HYPDHQ96EM0 354 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 DOHHQ9BU89 302 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 TRIM8Q9BZR9 551 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 BRINP2Q9C0B6 783 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 RNF6Q9Y252 685 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 ADGRG4Q8IZF6 3080 aa21.15■□□□□ 0.98
COL9A3-213ENST00000489045 ARHGAP21Q5T5U3 1957 aa21.14■□□□□ 0.98
COL9A3-213ENST00000489045 CAPN14A8MX76 684 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 ATP1B1P05026 303 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 CHN1P15882 459 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 S1PR1P21453 382 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 ALDH9A1P49189 494 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 HTR6P50406 440 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 NUP107P57740 925 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 FBXW4P57775 412 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 TRA2BP62995 288 aaKnown RBP21.14■□□□□ 0.97
COL9A3-213ENST00000489045 PMPCAQ10713 525 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 PRICKLE4Q2TBC4 344 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 FAM111BQ6SJ93 734 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 LRRC25Q8N386 305 aaPredicted RBP21.14■□□□□ 0.97
COL9A3-213ENST00000489045 VWA5B2Q8N398 1253 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 METTL6Q8TCB7 284 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 CHTF18Q8WVB6 975 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 DIO2Q92813 273 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 TRIM44Q96DX7 344 aaPredicted RBP21.14■□□□□ 0.97
COL9A3-213ENST00000489045 JSRP1Q96MG2 331 aaPredicted RBP21.14■□□□□ 0.97
COL9A3-213ENST00000489045 FAIM2Q9BWQ8 316 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 EXO5Q9H790 373 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 MAT2BQ9NZL9 334 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 DTX4Q9Y2E6 619 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 STK38LQ9Y2H1 464 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 NPFFR2Q9Y5X5 522 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 PDZD2O15018 2839 aa21.14■□□□□ 0.97
COL9A3-213ENST00000489045 TACC2O95359 2948 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 TRGV5A0A0B4J1U4 118 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 FIGNL2A6NMB9 653 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 TP53I11O14683 189 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 HCN1O60741 890 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 ULK1O75385 1050 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 CSNK2A2P19784 350 aaPredicted RBP21.13■□□□□ 0.97
COL9A3-213ENST00000489045 ENDOUP21128 410 aaKnown RBP21.13■□□□□ 0.97
COL9A3-213ENST00000489045 GPX3P22352 226 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 ACVR2AP27037 513 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 CHRNB4P30926 498 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 TMED10P49755 219 aaKnown RBP21.13■□□□□ 0.97
COL9A3-213ENST00000489045 NRG3P56975 720 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 DUSP2Q05923 314 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 MGAT2Q10469 447 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 LCP2Q13094 533 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 FAM180BQ6P0A1 224 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 PRR22Q8IZ63 422 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 ACPTQ9BZG2 426 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 MCM8Q9UJA3 840 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 ACAD8Q9UKU7 415 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 PSME2Q9UL46 239 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 EMCNQ9ULC0 261 aa21.13■□□□□ 0.97
COL9A3-213ENST00000489045 A0A1W2PPM1 405 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 ENO4A6NNW6 628 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 FOXO6A8MYZ6 492 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 ESRRBO95718 433 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 PKNOX1P55347 436 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 MAP4K2Q12851 820 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 EXOSC7Q15024 291 aaKnown RBP21.12■□□□□ 0.97
COL9A3-213ENST00000489045 TBCELQ5QJ74 424 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 BICRALQ6AI39 1079 aa21.12■□□□□ 0.97
COL9A3-213ENST00000489045 ACAD11Q709F0 780 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms