RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 FAM219BQ5XKK7 198 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 Q6ZRG5 221 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 TOM1L2Q6ZVM7 507 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 RABEPKQ7Z6M1 372 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 THEM5Q8N1Q8 247 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 BEST4Q8NFU0 473 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 TBCKQ8TEA7 893 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 ULK4Q96C45 1275 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 AP2M1Q96CW1 435 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 TBC1D31Q96DN5 1066 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 NUS1Q96E22 293 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 C16orf58Q96GQ5 468 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 EPSTI1Q96J88 318 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 SIGLEC12Q96PQ1 595 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 S1PR3Q99500 378 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 ABCG8Q9H221 673 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 PRMT8Q9NR22 394 aaPredicted RBP2.59□□□□□ -1.99
RFC4-213ENST00000489028 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.59□□□□□ -1.99
RFC4-213ENST00000489028 ZNF275Q9NSD4 429 aaPredicted RBP2.59□□□□□ -1.99
RFC4-213ENST00000489028 ANO10Q9NW15 660 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 CYP39A1Q9NYL5 469 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 IL17CQ9P0M4 197 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 HMG20BQ9P0W2 317 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 APPL1Q9UKG1 709 aa2.59□□□□□ -1.99
RFC4-213ENST00000489028 C19orf81C9J6K1 198 aa2.58□□□□□ -2
RFC4-213ENST00000489028 BCAS2O75934 225 aaPredicted RBP2.58□□□□□ -2
RFC4-213ENST00000489028 CPNE6O95741 557 aa2.58□□□□□ -2
RFC4-213ENST00000489028 SBK2P0C263 348 aa2.58□□□□□ -2
RFC4-213ENST00000489028 SERPINB6P35237 376 aa2.58□□□□□ -2
RFC4-213ENST00000489028 TKTL1P51854 596 aa2.58□□□□□ -2
RFC4-213ENST00000489028 SLC12A3P55017 1021 aa2.58□□□□□ -2
RFC4-213ENST00000489028 STARD6P59095 220 aa2.58□□□□□ -2
RFC4-213ENST00000489028 PAX2Q02962 417 aa2.58□□□□□ -2
RFC4-213ENST00000489028 WASHC5Q12768 1159 aa2.58□□□□□ -2
RFC4-213ENST00000489028 HEPACAMQ14CZ8 416 aa2.58□□□□□ -2
RFC4-213ENST00000489028 HFEQ30201 348 aa2.58□□□□□ -2
RFC4-213ENST00000489028 TOR1AIP1Q5JTV8 583 aa2.58□□□□□ -2
RFC4-213ENST00000489028 OLFML2AQ68BL7 652 aa2.58□□□□□ -2
RFC4-213ENST00000489028 ABRAXAS1Q6UWZ7 409 aa2.58□□□□□ -2
RFC4-213ENST00000489028 CATSPER4Q7RTX7 472 aa2.58□□□□□ -2
RFC4-213ENST00000489028 MIER3Q7Z3K6 550 aa2.58□□□□□ -2
RFC4-213ENST00000489028 CNTN4Q8IWV2 1026 aa2.58□□□□□ -2
RFC4-213ENST00000489028 PARP8Q8N3A8 854 aa2.58□□□□□ -2
RFC4-213ENST00000489028 HDDC3Q8N4P3 179 aa2.58□□□□□ -2
RFC4-213ENST00000489028 ZNF525Q8N782 197 aa2.58□□□□□ -2
RFC4-213ENST00000489028 ANKRD20A12PQ8NF67 263 aa2.58□□□□□ -2
RFC4-213ENST00000489028 FAM46BQ96A09 425 aa2.58□□□□□ -2
RFC4-213ENST00000489028 RBM18Q96H35 190 aaKnown RBP2.58□□□□□ -2
RFC4-213ENST00000489028 B3GALT6Q96L58 329 aa2.58□□□□□ -2
RFC4-213ENST00000489028 TMEM237Q96Q45 408 aa2.58□□□□□ -2
RFC4-213ENST00000489028 PRAM1Q96QH2 718 aa2.58□□□□□ -2
RFC4-213ENST00000489028 RUFY1Q96T51 708 aa2.58□□□□□ -2
RFC4-213ENST00000489028 NTMT1Q9BV86 223 aa2.58□□□□□ -2
RFC4-213ENST00000489028 OSBPL8Q9BZF1 889 aa2.58□□□□□ -2
RFC4-213ENST00000489028 NAPBQ9H115 298 aa2.58□□□□□ -2
RFC4-213ENST00000489028 C1orf21Q9H246 121 aa2.58□□□□□ -2
RFC4-213ENST00000489028 SLC25A19Q9HC21 320 aa2.58□□□□□ -2
RFC4-213ENST00000489028 ABCC13Q9NSE7 274 aa2.58□□□□□ -2
RFC4-213ENST00000489028 EIF3KQ9UBQ5 218 aaKnown RBP2.58□□□□□ -2
RFC4-213ENST00000489028 CLIP2Q9UDT6 1046 aa2.58□□□□□ -2
RFC4-213ENST00000489028 TDRKHQ9Y2W6 561 aaKnown RBP2.58□□□□□ -2
RFC4-213ENST00000489028 TRBV2A0A0J9YWF9 115 aa2.57□□□□□ -2
RFC4-213ENST00000489028 KRT87PA6NCN2 255 aa2.57□□□□□ -2
RFC4-213ENST00000489028 SLC9B1P1A6NJY1 282 aa2.57□□□□□ -2
RFC4-213ENST00000489028 CCT8L1PA6NM43 557 aa2.57□□□□□ -2
RFC4-213ENST00000489028 VEGFDO43915 354 aa2.57□□□□□ -2
RFC4-213ENST00000489028 B3GALNT1O75752 331 aa2.57□□□□□ -2
RFC4-213ENST00000489028 CHRNGP07510 517 aa2.57□□□□□ -2
RFC4-213ENST00000489028 GSTA2P09210 222 aa2.57□□□□□ -2
RFC4-213ENST00000489028 GDF1P27539 372 aa2.57□□□□□ -2
RFC4-213ENST00000489028 SERPINH1P50454 418 aaKnown RBP2.57□□□□□ -2
RFC4-213ENST00000489028 GSTO1P78417 241 aa2.57□□□□□ -2
RFC4-213ENST00000489028 IL1RL1Q01638 556 aa2.57□□□□□ -2
RFC4-213ENST00000489028 STXBP2Q15833 593 aa2.57□□□□□ -2
RFC4-213ENST00000489028 PPP1R3AQ16821 1122 aa2.57□□□□□ -2
RFC4-213ENST00000489028 PRAMEF8Q5VWM4 474 aa2.57□□□□□ -2
RFC4-213ENST00000489028 KCTD11Q693B1 232 aa2.57□□□□□ -2
RFC4-213ENST00000489028 Q6ZVH6 145 aa2.57□□□□□ -2
RFC4-213ENST00000489028 PRSS42Q7Z5A4 293 aa2.57□□□□□ -2
RFC4-213ENST00000489028 FBXW8Q8N3Y1 598 aa2.57□□□□□ -2
RFC4-213ENST00000489028 SFRP1Q8N474 314 aa2.57□□□□□ -2
RFC4-213ENST00000489028 ICA1LQ8NDH6 482 aa2.57□□□□□ -2
RFC4-213ENST00000489028 GOLGA5Q8TBA6 731 aa2.57□□□□□ -2
RFC4-213ENST00000489028 RSPH1Q8WYR4 309 aa2.57□□□□□ -2
RFC4-213ENST00000489028 CAPNS2Q96L46 248 aa2.57□□□□□ -2
RFC4-213ENST00000489028 NAP1L3Q99457 506 aaPredicted RBP2.57□□□□□ -2
RFC4-213ENST00000489028 PAXXQ9BUH6 204 aa2.57□□□□□ -2
RFC4-213ENST00000489028 Q9HAA7 133 aa2.57□□□□□ -2
RFC4-213ENST00000489028 ADGRL4Q9HBW9 690 aa2.57□□□□□ -2
RFC4-213ENST00000489028 GDF3Q9NR23 364 aa2.57□□□□□ -2
RFC4-213ENST00000489028 PNPLA3Q9NST1 481 aa2.57□□□□□ -2
RFC4-213ENST00000489028 DNAJC11Q9NVH1 559 aa2.57□□□□□ -2
RFC4-213ENST00000489028 HPF1Q9NWY4 346 aa2.57□□□□□ -2
RFC4-213ENST00000489028 VNN3Q9NY84 501 aa2.57□□□□□ -2
RFC4-213ENST00000489028 EPS15L1Q9UBC2 864 aa2.57□□□□□ -2
RFC4-213ENST00000489028 CLEC4EQ9ULY5 219 aa2.57□□□□□ -2
RFC4-213ENST00000489028 ERVK-19Q9WJR5 959 aa2.57□□□□□ -2
RFC4-213ENST00000489028 KLF2Q9Y5W3 355 aaPredicted RBP2.57□□□□□ -2
RFC4-213ENST00000489028 IGHV3OR16-12A0A075B7B8 117 aa2.56□□□□□ -2
RFC4-213ENST00000489028 IGHV3-35A0A0C4DH35 117 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms