RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 SNAP47Q5SQN1 464 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 ATAD3BQ5T9A4 648 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 PRAMEF8Q5VWM4 474 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 PRAMEF7Q5VXH5 474 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 TNFAIP8L2Q6P589 184 aaPredicted RBP6.62□□□□□ -1.35
SF3A3-206ENST00000487062 TLDC1Q6P9B6 456 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 TMEM107Q6UX40 140 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 PRSS41Q7RTY9 318 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 PIWIL3Q7Z3Z3 882 aaKnown RBP6.62□□□□□ -1.35
SF3A3-206ENST00000487062 ATCAYQ86WG3 371 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 KRT73Q86Y46 540 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 ARMC8Q8IUR7 673 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 D2HGDHQ8N465 521 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 ARHGEF39Q8N4T4 335 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 EID2Q8N6I1 236 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 FAM86B1Q8N7N1 296 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 OR5T3Q8NGG3 340 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 OR9A2Q8NGT5 310 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 OR5K1Q8NHB7 308 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 BBS10Q8TAM1 723 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 FAM110BQ8TC76 370 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 MIPOL1Q8TD10 442 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 XAGE5Q8WWM1 108 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 TMBIM1Q969X1 311 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 TBC1D20Q96BZ9 403 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 ELP4Q96EB1 424 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 MVB12AQ96EY5 273 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 MMABQ96EY8 250 aaPredicted RBP6.62□□□□□ -1.35
SF3A3-206ENST00000487062 SLC41A2Q96JW4 573 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 MS4A4EQ96PG1 132 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 CSF3RQ99062 836 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 SPATA5L1Q9BVQ7 753 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 OSBPL11Q9BXB4 747 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 ACTRT3Q9BYD9 372 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 SPRTNQ9H040 489 aaPredicted RBP6.62□□□□□ -1.35
SF3A3-206ENST00000487062 OR51I1Q9H343 314 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF768Q9H5H4 540 aaKnown RBP6.62□□□□□ -1.35
SF3A3-206ENST00000487062 TRIM45Q9H8W5 580 aaPredicted RBP6.62□□□□□ -1.35
SF3A3-206ENST00000487062 IL1RAPQ9NPH3 570 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 ENAMQ9NRM1 1142 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 CUTCQ9NTM9 273 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 EXD2Q9NVH0 621 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 NTMQ9P121 344 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 NDOR1Q9UHB4 597 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 SERTAD3Q9UJW9 196 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 GMEB2Q9UKD1 530 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 RAB23Q9ULC3 237 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 LIPT1Q9Y234 373 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 AK5Q9Y6K8 562 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 KNL1Q8NG31 2342 aa6.62□□□□□ -1.35
SF3A3-206ENST00000487062 A0A0G2JPF8 293 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 A8MU76 341 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 HNRNPCL2B2RXH8 293 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 PATE3B3GLJ2 98 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 HNRNPCL3B7ZW38 293 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 G3V2T6 193 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 M0QX08 132 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 DENRO43583 198 aaKnown RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 FGF17O60258 216 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 OR10H2O60403 315 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 DPM1O60762 260 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 B4GALT2O60909 372 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 CTNSO60931 367 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 LDB3O75112 727 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 DNAJB6O75190 326 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 E2F6O75461 281 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 SOX30O94993 753 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 PRSS23O95084 383 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 RASAL1O95294 804 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 PGM3O95394 542 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 HPRP00739 348 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 MT-ND1P03886 318 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 SEMG1P04279 462 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 ATP1B1P05026 303 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 HMGN2P05204 90 aaKnown RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 TFPTP0C1Z6 253 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 ANKRD34CP0C6C1 535 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF883P0CG24 379 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 SLC35E2P0CK97 266 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 HNRNPCL4P0DMR1 293 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 MYF5P13349 255 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 CKMT2P17540 419 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 NT5EP21589 574 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 AQP1P29972 269 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 DNAJA1P31689 397 aaKnown RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 CSF2RBP32927 897 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 MPLP40238 635 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 ITGA1P56199 1179 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 HSD17B7P56937 341 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 PCBP3P57721 371 aaKnown RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 PSMA6P60900 246 aaKnown RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 RPS26P62854 115 aaKnown RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 CCL7P80098 99 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 HPCAP84074 193 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 ACY1Q03154 408 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 CFHR1Q03591 330 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 STX4Q12846 297 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 LASP1Q14847 261 aaKnown RBP6.61□□□□□ -1.35
SF3A3-206ENST00000487062 GPR19Q15760 415 aa6.61□□□□□ -1.35
SF3A3-206ENST00000487062 NKG7Q16617 165 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms