RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 VPS39Q96JC1 886 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 MARK4Q96L34 752 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 SERPINB12Q96P63 405 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 EFCAB11Q9BUY7 163 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 OSBPL11Q9BXB4 747 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 BEX2Q9BXY8 128 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 PHACTR1Q9C0D0 580 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 LACRTQ9GZZ8 138 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 EHD1Q9H4M9 534 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 RPF2Q9H7B2 306 aaKnown RBP6.94□□□□□ -1.3
PDPN-205ENST00000487038 CNOT10Q9H9A5 744 aaKnown RBP6.94□□□□□ -1.3
PDPN-205ENST00000487038 PRDM7Q9NQW5 492 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 TMEM160Q9NX00 188 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 KLRF1Q9NZS2 232 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 PHF11Q9UIL8 331 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 LAMP3Q9UQV4 416 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 OARD1Q9Y530 152 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 SVEP1Q4LDE5 3571 aa6.94□□□□□ -1.3
PDPN-205ENST00000487038 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.93□□□□□ -1.3
PDPN-205ENST00000487038 LRRC14BA6NHZ5 514 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 SLC22A20A6NK97 555 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 HRKO00198 91 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 PLOD2O00469 737 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 HCRTR2O43614 444 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 CBR3O75828 277 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 SCELO95171 688 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 CD8BP10966 210 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 HIST1H1TP22492 207 aaPredicted RBP6.93□□□□□ -1.3
PDPN-205ENST00000487038 ATP5A1P25705 553 aaKnown RBP6.93□□□□□ -1.3
PDPN-205ENST00000487038 LOXP28300 417 aaPredicted RBP6.93□□□□□ -1.3
PDPN-205ENST00000487038 GALNSP34059 522 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 THBS2P35442 1172 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 ANP32AP39687 249 aaKnown RBP6.93□□□□□ -1.3
PDPN-205ENST00000487038 MAGEA6P43360 314 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 TIAL1Q01085 375 aaKnown RBP eCLIP6.93□□□□□ -1.3
PDPN-205ENST00000487038 TNFRSF17Q02223 184 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 RUNX1T1Q06455 604 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 SNTA1Q13424 505 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 TMEM35AQ53FP2 167 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 TMEM81Q6P7N7 255 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 ZNF793Q6ZN11 406 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 SH2D5Q6ZV89 423 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 GALNT7Q86SF2 657 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 ADAMTSL2Q86TH1 951 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 TRIM42Q8IWZ5 723 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 OR4N5Q8IXE1 308 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 TCAIMQ8N3R3 496 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 C17orf47Q8NEP4 570 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 FBXW5Q969U6 566 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 CTHRC1Q96CG8 243 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 STARD4Q96DR4 205 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 PTCD3Q96EY7 689 aaKnown RBP6.93□□□□□ -1.3
PDPN-205ENST00000487038 PDLIM5Q96HC4 596 aaKnown RBP6.93□□□□□ -1.3
PDPN-205ENST00000487038 HS6ST2Q96MM7 605 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 F2RL3Q96RI0 385 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 PIGQQ9BRB3 760 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 CENPKQ9BS16 269 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 KLHL4Q9C0H6 718 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 OR2B2Q9GZK3 357 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 SHARPINQ9H0F6 387 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 OPN3Q9H1Y3 402 aaPredicted RBP6.93□□□□□ -1.3
PDPN-205ENST00000487038 LRTM1Q9HBL6 345 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 BARX1Q9HBU1 254 aaPredicted RBP6.93□□□□□ -1.3
PDPN-205ENST00000487038 WWOXQ9NZC7 414 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 PROCRQ9UNN8 238 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 MED12Q93074 2177 aa6.93□□□□□ -1.3
PDPN-205ENST00000487038 YLPM1P49750 1951 aaKnown RBP6.93□□□□□ -1.3
PDPN-205ENST00000487038 NPEPPSL1A6NEC2 478 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 GOLGA8MH3BSY2 632 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 EMC8O43402 210 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 TTC4O95801 387 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 TBX6O95947 436 aaPredicted RBP6.92□□□□□ -1.3
PDPN-205ENST00000487038 ZNF708P17019 499 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 ZNF37AP17032 561 aaPredicted RBP6.92□□□□□ -1.3
PDPN-205ENST00000487038 NAGAP17050 411 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 PGAM1P18669 254 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 TBXA2RP21731 343 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 ABCD3P28288 659 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 SERPINB1P30740 379 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 SLC6A12P48065 614 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 VPS41P49754 854 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 LHX2P50458 406 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 RAP1GDS1P52306 607 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 GFRA1P56159 465 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 EEFSECP57772 596 aaKnown RBP6.92□□□□□ -1.3
PDPN-205ENST00000487038 SIRPAP78324 504 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 FUT7Q11130 342 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 CRYMQ14894 314 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 TRIP13Q15645 432 aaPredicted RBP6.92□□□□□ -1.3
PDPN-205ENST00000487038 ZNF474Q6S9Z5 364 aaPredicted RBP6.92□□□□□ -1.3
PDPN-205ENST00000487038 PLXDC2Q6UX71 529 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 DGAT2L6Q6ZPD8 337 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 VN1R5Q7Z5H4 357 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 NKAPQ8N5F7 415 aaKnown RBP6.92□□□□□ -1.3
PDPN-205ENST00000487038 GBP7Q8N8V2 638 aaPredicted RBP6.92□□□□□ -1.3
PDPN-205ENST00000487038 MCUQ8NE86 351 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 RDH11Q8TC12 318 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 AKAP1Q92667 903 aaKnown RBP eCLIP6.92□□□□□ -1.3
PDPN-205ENST00000487038 UBE2E3Q969T4 207 aa6.92□□□□□ -1.3
PDPN-205ENST00000487038 RHBDF1Q96CC6 855 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms