RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 FOXQ1Q9C009 403 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 PCDHGA6Q9Y5G7 932 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 PCDH17O14917 1159 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 NOL3O60936 208 aaKnown RBP19.17■□□□□ 0.66
HPS3-206ENST00000486530 PTGER1P34995 402 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 GGT2P36268 569 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 RNF44Q7L0R7 432 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 DGLUCYQ7Z3D6 616 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 PARP8Q8N3A8 854 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 ZNF655Q8N720 491 aaPredicted RBP19.17■□□□□ 0.66
HPS3-206ENST00000486530 ELP4Q96EB1 424 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 ALPK1Q96QP1 1244 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 NIPSNAP1Q9BPW8 284 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 DUSP21Q9H596 190 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 CCNB1IP1Q9NPC3 277 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 HRASLS2Q9NWW9 162 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 MS4A12Q9NXJ0 267 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 KCMF1Q9P0J7 381 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 PCDHGB1Q9Y5G3 927 aa19.17■□□□□ 0.66
HPS3-206ENST00000486530 A0A1W2PS29 197 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 ZSCAN9O15535 394 aaPredicted RBP19.16■□□□□ 0.66
HPS3-206ENST00000486530 ASNA1O43681 348 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 MRPS14O60783 128 aaKnown RBP19.16■□□□□ 0.66
HPS3-206ENST00000486530 ITIH1P19827 911 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 CBLP22681 906 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 MC3RP41968 323 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 SLC35A2P78381 396 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 FUT5Q11128 374 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 DEFB134Q4QY38 66 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 GTF2IRD2BQ6EKJ0 949 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 GTF2IRD2Q86UP8 949 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 ENTHD1Q8IYW4 607 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 NUP43Q8NFH3 380 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 MUL1Q969V5 352 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 DHRS1Q96LJ7 313 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 ORAI3Q9BRQ5 295 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 LHPPQ9H008 270 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 EVA1BQ9NVM1 165 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 TDRD6O60522 2096 aaKnown RBP19.16■□□□□ 0.66
HPS3-206ENST00000486530 H3BMQ9 156 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 FFAR1O14842 300 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 PCMT1P22061 227 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 TLX1P31314 330 aaPredicted RBP19.16■□□□□ 0.66
HPS3-206ENST00000486530 CSNK2BP67870 215 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 PIGFQ07326 219 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 LAIR1Q6GTX8 287 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 FRMPD2BQ6IN97 320 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 OOSP2Q86WS3 158 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 LRRC25Q8N386 305 aaPredicted RBP19.16■□□□□ 0.66
HPS3-206ENST00000486530 RLN3Q8WXF3 142 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 COG8Q96MW5 612 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 YIPF4Q9BSR8 244 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 RSPO3Q9BXY4 272 aaPredicted RBP19.16■□□□□ 0.66
HPS3-206ENST00000486530 CCDC90BQ9GZT6 254 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 KLHL25Q9H0H3 589 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 LIN28AQ9H9Z2 209 aaKnown RBP19.16■□□□□ 0.66
HPS3-206ENST00000486530 RHCGQ9UBD6 479 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 DAPP1Q9UN19 280 aa19.16■□□□□ 0.66
HPS3-206ENST00000486530 TRIOO75962 3097 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 LOC105369274A0A096LPK9 316 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 IGHV1OR15-9A0A0B4J2B8 117 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 LOC102723532A0A0G2JNH3 316 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 A0A0G2JPF8 293 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 HNRNPCL2B2RXH8 293 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 HNRNPCL3B7ZW38 293 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 H0YGG7 62 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 PCDHGA12O60330 932 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 CHRM4P08173 479 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 HNRNPCL4P0DMR1 293 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 ALOX12P18054 663 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 LSSP48449 732 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 TMBIM6P55061 237 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 ARF3P61204 181 aaPredicted RBP19.15■□□□□ 0.66
HPS3-206ENST00000486530 SNRPNP63162 240 aaKnown RBP19.15■□□□□ 0.66
HPS3-206ENST00000486530 MANEAQ5SRI9 462 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 TCTN3Q6NUS6 607 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 OR4N4Q8N0Y3 316 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 FAM160A2Q8N612 972 aaPredicted RBP19.15■□□□□ 0.66
HPS3-206ENST00000486530 SHDQ96IW2 340 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 SLC6A18Q96N87 628 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 OR7D2Q96RA2 312 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 LYRM4Q9HD34 91 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 FBXL21Q9UKT6 434 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 ACAD8Q9UKU7 415 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 TMCC3Q9ULS5 477 aa19.15■□□□□ 0.66
HPS3-206ENST00000486530 OR5K3A6NET4 321 aa19.14■□□□□ 0.65
HPS3-206ENST00000486530 FAM20BO75063 409 aa19.14■□□□□ 0.65
HPS3-206ENST00000486530 WBP4O75554 376 aaKnown RBP19.14■□□□□ 0.65
HPS3-206ENST00000486530 OXSR1O95747 527 aaPredicted RBP19.14■□□□□ 0.65
HPS3-206ENST00000486530 PVRP15151 417 aa19.14■□□□□ 0.65
HPS3-206ENST00000486530 KRT20P35900 424 aa19.14■□□□□ 0.65
HPS3-206ENST00000486530 SMIM11AP58511 58 aa19.14■□□□□ 0.65
HPS3-206ENST00000486530 HHEXQ03014 270 aa19.14■□□□□ 0.65
HPS3-206ENST00000486530 ZP2Q05996 745 aa19.14■□□□□ 0.65
HPS3-206ENST00000486530 DEF8Q6ZN54 512 aa19.14■□□□□ 0.65
HPS3-206ENST00000486530 SFTPA2Q8IWL1 248 aa19.14■□□□□ 0.65
HPS3-206ENST00000486530 DEPDC4Q8N2C3 294 aa19.14■□□□□ 0.65
HPS3-206ENST00000486530 AQP11Q8NBQ7 271 aa19.14■□□□□ 0.65
HPS3-206ENST00000486530 OR4K14Q8NGD5 310 aa19.14■□□□□ 0.65
HPS3-206ENST00000486530 MAFAQ8NHW3 353 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms