RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 CHKBQ9Y259 395 aa3.74□□□□□ -1.81
SMARCC1-207ENST00000485833 WIPI2Q9Y4P8 454 aa3.74□□□□□ -1.81
SMARCC1-207ENST00000485833 MAGED1Q9Y5V3 778 aaPredicted RBP3.74□□□□□ -1.81
SMARCC1-207ENST00000485833 SLCO1B1Q9Y6L6 691 aa3.74□□□□□ -1.81
SMARCC1-207ENST00000485833 ZFHX3Q15911 3703 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 TTC41PQ6P2S7 1318 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 SPENQ96T58 3664 aaKnown RBP3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 NUMA1Q14980 2115 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 TRBV5-5A0A0J9YX44 114 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 OR4Q2P0C623 313 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 PCP11498 1178 aaKnown RBP3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 ARF4P18085 180 aaPredicted RBP3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 CD22P20273 847 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 CD27P26842 260 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 TMOD1P28289 359 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 ASCL1P50553 236 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 SEMG2Q02383 582 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 TRIM29Q14134 588 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 PTPRCAPQ14761 206 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 VWC2Q2TAL6 325 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 BMP2KLQ5H9B9 411 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 GLRA4Q5JXX5 417 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 FAM43BQ6ZT52 329 aaPredicted RBP3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 GPR65Q8IYL9 337 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 METTL4Q8N3J2 472 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 TTC30BQ8N4P2 665 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 AVL9Q8NBF6 648 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 C17orf47Q8NEP4 570 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 OR5T2Q8NGG2 359 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 C11orf45Q8TAV5 145 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 MAP3K3Q99759 626 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 OVOL2Q9BRP0 275 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 ZNF577Q9BSK1 485 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 SPZ1Q9BXG8 430 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 NUSAP1Q9BXS6 441 aaKnown RBP3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 TDRD1Q9BXT4 1180 aaKnown RBP3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 CDH20Q9HBT6 801 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 B3GAT2Q9NPZ5 323 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 TP53TG3Q9ULZ0 132 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 NAV3Q8IVL0 2385 aa3.73□□□□□ -1.81
SMARCC1-207ENST00000485833 PDZD2O15018 2839 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 A0A1W2PPK0 400 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 PRRG1O14668 218 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 TRDMT1O14717 391 aaKnown RBP3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 IFIT3O14879 490 aaKnown RBP3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 HPRP00739 348 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 ATP1B1P05026 303 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 THEGLP0DJG4 465 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 SAGP10523 405 aaPredicted RBP3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 NR2F1P10589 423 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 PCGF2P35227 344 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 SOX3P41225 446 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 P2RY2P41231 377 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 OR3A2P47893 321 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 CCDC173Q0VFZ6 552 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 LAMTOR4Q0VGL1 99 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 TRAP1Q12931 704 aaKnown RBP3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 SGCGQ13326 291 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 SNTB1Q13884 538 aaKnown RBP3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 TMEM132DQ14C87 1099 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 KARSQ15046 597 aaKnown RBP3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 NPTX1Q15818 432 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 MAPK6Q16659 721 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 GPR33Q49SQ1 333 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 SLC8B1Q6J4K2 584 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 IL17RELQ6ZVW7 336 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 ZNF410Q86VK4 478 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 HDDC3Q8N4P3 179 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 NOA1Q8NC60 698 aaKnown RBP3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 TSTD1Q8NFU3 115 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 RSPH1Q8WYR4 309 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 MSANTD3Q96H12 275 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 CNOT6LQ96LI5 555 aaKnown RBP3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 LGMNQ99538 433 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 CPNE1Q99829 537 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 XPNPEP1Q9NQW7 623 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 FAM169AQ9Y6X4 670 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 ANAPC1Q9H1A4 1944 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 HIVEP1P15822 2718 aa3.72□□□□□ -1.81
SMARCC1-207ENST00000485833 EDDM13A0A1B0GTR0 161 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 K7EQS6 105 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 SGK1O00141 431 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 TFECO14948 347 aaPredicted RBP3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 MSH4O15457 936 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 ACSL3O95573 720 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 ATP5BP06576 529 aaKnown RBP3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 CSN3P07498 182 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 SERPINF2P08697 491 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 CALM1P0DP23 149 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 CALM2P0DP24 149 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 CALM3P0DP25 149 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 NMT1P30419 496 aaKnown RBP3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 ATXN3P54252 364 aaPredicted RBP3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 GFPT1Q06210 699 aaPredicted RBP3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 RUNX3Q13761 415 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 CWC27Q6UX04 472 aaKnown RBP3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 GDPGP1Q6ZNW5 385 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 FCRLAQ7L513 359 aa3.71□□□□□ -1.82
SMARCC1-207ENST00000485833 LPCAT2Q7L5N7 544 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms