RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SFXN3Q9BWM7 321 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 DDX47Q9H0S4 455 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 EHD1Q9H4M9 534 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 WDR41Q9HAD4 459 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 SNX15Q9NRS6 342 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 MS4A12Q9NXJ0 267 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 KLHL28Q9NXS3 571 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 TXNDC16Q9P2K2 825 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 ANGPTL3Q9Y5C1 460 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 NPFFR2Q9Y5X5 522 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 TLN2Q9Y4G6 2542 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 RAI1Q7Z5J4 1906 aaPredicted RBP6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 OR6C76A6NM76 312 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 WASHC1A8K0Z3 465 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 PRAMEF4O60810 478 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 IL18BPO95998 194 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 GBAP04062 536 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 NR2F6P10588 404 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 FPR1P21462 350 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 NT5EP21589 574 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 PIK3R1P27986 724 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 SOX18P35713 384 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 CASP3P42574 277 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 SLCO1A2P46721 670 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 NAGLUP54802 743 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 HNRNPH2P55795 449 aaKnown RBP6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 ARL4CP56559 192 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 SIRPAP78324 504 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 IGLV3-21P80748 117 aaPredicted RBP6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 PDIA2Q13087 525 aaKnown RBP6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 BIKQ13323 160 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 OR4D1Q15615 310 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 CYP1B1Q16678 543 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 SPRED3Q2MJR0 410 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 PRAMEF9Q5VWM5 478 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 PPP4R4Q6NUP7 873 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 ENPP6Q6UWR7 440 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 RAPH1Q70E73 1250 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 CHMP1BQ7LBR1 199 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 LRRC70Q7Z2Q7 622 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 IFNEQ86WN2 208 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 CXorf67Q86X51 503 aaPredicted RBP6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 GALNT12Q8IXK2 581 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 ZNF441Q8N8Z8 693 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 FBXO36Q8NEA4 188 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 SPPL2AQ8TCT8 520 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 NANOS1Q8WY41 292 aaKnown RBP6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 SMPDL3BQ92485 455 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 TSPAN17Q96FV3 270 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 OSBPL11Q9BXB4 747 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 ANGPTL4Q9BY76 406 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 CD244Q9BZW8 370 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 TRIM31Q9BZY9 425 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 DERL2Q9GZP9 239 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 CALHM2Q9HA72 323 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 SERHLQ9NQF3 203 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 ZNF226Q9NYT6 803 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 EHD3Q9NZN3 535 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 OPTCQ9UBM4 332 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 TRPS1Q9UHF7 1281 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 BCAP29Q9UHQ4 241 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 PACSIN3Q9UKS6 424 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 HIVEP2P31629 2446 aa6.09□□□□□ -1.43
RTFDC1-206ENST00000477485 CSPG4Q6UVK1 2322 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 ANKRD33BA6NCL7 494 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 PLPP1O14494 284 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 GPR75O95800 540 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 ACTL6AO96019 429 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 FAM58BPP0C7Q3 252 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 NID1P14543 1247 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 CD1DP15813 335 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 STMN1P16949 149 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 CNTFP26441 200 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 ABCD3P28288 659 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 PTPN6P29350 595 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 SERPINB1P30740 379 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 GGT5P36269 586 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 STARP49675 285 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 ATP6V0D1P61421 351 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 POU4F1Q01851 419 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 PLCXD2Q0VAA5 305 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 SLMAPQ14BN4 828 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 MORF4L2Q15014 288 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 ACKR1Q16570 336 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 NHSL2Q5HYW2 709 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 TIGD3Q6B0B8 471 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 OR52E8Q6IFG1 317 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 SCIMPQ6UWF3 145 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 ZNF550Q7Z398 422 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 NUDT13Q86X67 352 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 TRIM42Q8IWZ5 723 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 KLHL7Q8IXQ5 586 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 UBQLNLQ8IYU4 475 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 ZBED8Q8IZ13 594 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 LRRC75A-AS1Q8N1F1 130 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 TEX9Q8N6V9 391 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 ADCY4Q8NFM4 1077 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 OR7G3Q8NG95 312 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 SPATA3Q8NHX4 192 aa6.08□□□□□ -1.44
RTFDC1-206ENST00000477485 HUS1BQ8NHY5 278 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms