RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 RAB15P59190 212 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 RPP38P78345 283 aaKnown RBP12.64□□□□□ -0.39
HDAC7-221ENST00000477203 EOGTQ5NDL2 527 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 SLC38A6Q8IZM9 456 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 OR10G2Q8NGC3 310 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 LILRB4Q8NHJ6 448 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 TRUB1Q8WWH5 349 aaKnown RBP12.64□□□□□ -0.39
HDAC7-221ENST00000477203 ZG16BQ96DA0 208 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 AMDHD1Q96NU7 426 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 HRASLS2Q9NWW9 162 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 LYVE1Q9Y5Y7 322 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 NCOR1O75376 2440 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 ALPK2Q86TB3 2170 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 PRAMEF27A3QJZ7 478 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 HMGN4O00479 90 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 LDB3O75112 727 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 CLEC3AO75596 197 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 F3P13726 295 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 BUD31P41223 144 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-221ENST00000477203 ISL1P61371 349 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 CCINQ13939 588 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 C6orf132Q5T0Z8 1188 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 REEP3Q6NUK4 255 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 VN1R4Q7Z5H5 301 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 LACC1Q8IV20 430 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 SLC35G5Q96KT7 338 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 SLC6A18Q96N87 628 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 QRFPRQ96P65 431 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 CSF3RQ99062 836 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 IL21RQ9HBE5 538 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 SEC14L3Q9UDX4 400 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 MMP17Q9ULZ9 603 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 A0A0A6YYD5 115 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 SHISA7A6NL88 538 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 GPR89AB7ZAQ6 455 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 SLC1A7O00341 560 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 CDC123O75794 336 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-221ENST00000477203 INMTO95050 263 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 MFN2O95140 757 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 HTR1AP08908 422 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 GPR89BP0CG08 455 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 LSSP48449 732 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 ITGA1P56199 1179 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 CDK5R2Q13319 367 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 PUM1Q14671 1186 aaKnown RBP eCLIP12.64□□□□□ -0.39
HDAC7-221ENST00000477203 OXA1LQ15070 435 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 AHSA2Q719I0 299 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 COMTD1Q86VU5 262 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 NRROSQ86YC3 692 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 METTL27Q8N6F8 245 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-221ENST00000477203 SLC37A2Q8TED4 501 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 PHF10Q8WUB8 498 aaKnown RBP12.64□□□□□ -0.39
HDAC7-221ENST00000477203 OR5P2Q8WZ92 322 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 LHPPQ9H008 270 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 KIR3DX1Q9H7L2 352 aa12.64□□□□□ -0.39
HDAC7-221ENST00000477203 DDX31Q9H8H2 851 aaKnown RBP12.64□□□□□ -0.39
HDAC7-221ENST00000477203 SEMA3DO95025 777 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 FADS2O95864 444 aaKnown RBP12.63□□□□□ -0.39
HDAC7-221ENST00000477203 IGHV4-34P06331 123 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 ARAFP10398 606 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 UGT2B7P16662 529 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 NTSP30990 170 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 TUBA4AP68366 448 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 MRPS21P82921 87 aaKnown RBP12.63□□□□□ -0.39
HDAC7-221ENST00000477203 PIN1Q13526 163 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-221ENST00000477203 FAM214AQ32MH5 1076 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 IQCCQ4KMZ1 466 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 ATAD3BQ5T9A4 648 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 FBXO42Q6P3S6 717 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 CCDC71Q8IV32 467 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-221ENST00000477203 OR7G1Q8NGA0 311 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 GOT1L1Q8NHS2 421 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-221ENST00000477203 NECTIN4Q96NY8 510 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 ZNF300Q96RE9 604 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-221ENST00000477203 TREX2Q9BQ50 279 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-221ENST00000477203 LMAN1LQ9HAT1 526 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 MAPRE3Q9UPY8 281 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 ENTPD4Q9Y227 616 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 ASCC3Q8N3C0 2202 aaKnown RBP12.63□□□□□ -0.39
HDAC7-221ENST00000477203 CLPXO76031 633 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 PRKACBP22694 351 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 SEPHS1P49903 392 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 LIM2P55344 173 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 ZNF691Q5VV52 312 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 IKBIPQ70UQ0 350 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 SLC22A16Q86VW1 577 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 BPHLQ86WA6 291 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-221ENST00000477203 ZNF540Q8NDQ6 660 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 OR2L5Q8NG80 312 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 OR52E4Q8NGH9 312 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 SLC9A6Q92581 669 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 RSC1A1Q92681 617 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 ROGDIQ9GZN7 287 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 CPNE7Q9UBL6 633 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 CLCA2Q9UQC9 943 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-221ENST00000477203 BOLA1Q9Y3E2 137 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 PCDHGB3Q9Y5G1 929 aa12.63□□□□□ -0.39
HDAC7-221ENST00000477203 CASC3O15234 703 aaKnown RBP12.62□□□□□ -0.39
HDAC7-221ENST00000477203 PRICKLE3O43900 615 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms