RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 KCTD18Q6PI47 426 aaPredicted RBP11.02□□□□□ -0.64
U2AF1-209ENST00000475639 ZNF767PQ75MW2 155 aa11.02□□□□□ -0.64
U2AF1-209ENST00000475639 LDB1Q86U70 411 aaPredicted RBP11.02□□□□□ -0.64
U2AF1-209ENST00000475639 NSMAFQ92636 917 aa11.02□□□□□ -0.64
U2AF1-209ENST00000475639 TMEM185BQ9H7F4 350 aa11.02□□□□□ -0.64
U2AF1-209ENST00000475639 NANSQ9NR45 359 aa11.02□□□□□ -0.64
U2AF1-209ENST00000475639 PCDHGC4Q9Y5F7 938 aa11.02□□□□□ -0.64
U2AF1-209ENST00000475639 QSER1Q2KHR3 1735 aa11.02□□□□□ -0.64
U2AF1-209ENST00000475639 MGAMO43451 1857 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 PEX12O00623 359 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 OR2B3O76000 313 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 FCER2P06734 321 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 PFKMP08237 780 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 S1PR1P21453 382 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 CCL23P55773 120 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 RCAN2Q14206 197 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 NDUFAF5Q5TEU4 345 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 MLIPQ5VWP3 458 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 TSPAN33Q86UF1 283 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 GPAT4Q86UL3 456 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 C12orf29Q8N999 325 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 TEX19Q8NA77 164 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 CCDC32Q9BV29 185 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 TMED9Q9BVK6 235 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 TSSK6Q9BXA6 273 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 HDHD5Q9BXW7 423 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 RANBP3Q9H6Z4 567 aaPredicted RBP11.02□□□□□ -0.65
U2AF1-209ENST00000475639 SLC28A3Q9HAS3 691 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 TDP1Q9NUW8 608 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 RNF6Q9Y252 685 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 TLR6Q9Y2C9 796 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 STRCQ7RTU9 1775 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 SCDO00767 359 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 SLC34A2O95436 690 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 DIRAS3O95661 229 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 OR8U9P0C7N5 309 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 CDKN1CP49918 316 aaPredicted RBP11.02□□□□□ -0.65
U2AF1-209ENST00000475639 SH3BP2P78314 561 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 BTBD16Q32M84 506 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 TMCO2Q7Z6W1 182 aaPredicted RBP11.02□□□□□ -0.65
U2AF1-209ENST00000475639 AMZ2Q86W34 360 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 ZNF584Q8IVC4 421 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 COPZ2Q9P299 210 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 COL14A1Q05707 1796 aaKnown RBP11.02□□□□□ -0.65
U2AF1-209ENST00000475639 TRBC2A0A5B9 178 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 FAM170BA6NMN3 283 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 M0R082 166 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 CLDN5O00501 218 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 BET1O15155 118 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 CILPO75339 1184 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 TGM6O95932 706 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 CD3GP09693 182 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 FPR1P21462 350 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 CORO1AP31146 461 aaKnown RBP11.02□□□□□ -0.65
U2AF1-209ENST00000475639 ACTR1BP42025 376 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 RPS5P46782 204 aaKnown RBP11.02□□□□□ -0.65
U2AF1-209ENST00000475639 NRIP1P48552 1158 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 NUDT6P53370 316 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 ACTR1AP61163 376 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 KCTD11Q693B1 232 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 CHST9Q7L1S5 443 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 LIX1LQ8IVB5 337 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 ASB15Q8WXK1 588 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 ISG20Q96AZ6 181 aaKnown RBP11.02□□□□□ -0.65
U2AF1-209ENST00000475639 RRNAD1Q96FB5 475 aaKnown RBP11.02□□□□□ -0.65
U2AF1-209ENST00000475639 PKP4Q99569 1192 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 ACTR6Q9GZN1 396 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 DPEP3Q9H4B8 488 aa11.02□□□□□ -0.65
U2AF1-209ENST00000475639 TLX2O43763 284 aaPredicted RBP11.01□□□□□ -0.65
U2AF1-209ENST00000475639 IL3P08700 152 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 ZNF250P15622 560 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 PFKLP17858 780 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 TACR2P21452 398 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 CCNOP22674 350 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 SLC6A6P31641 620 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 CA5AP35218 305 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 DLSTP36957 453 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 CDKN2CP42773 168 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 GZMKP49863 264 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 CRYBB1P53674 252 aaPredicted RBP11.01□□□□□ -0.65
U2AF1-209ENST00000475639 EMX2Q04743 252 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 ECH1Q13011 328 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 TNK1Q13470 666 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 C9orf131Q5VYM1 1079 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 MAP1SQ66K74 1059 aaPredicted RBP11.01□□□□□ -0.65
U2AF1-209ENST00000475639 SLC29A4Q7RTT9 530 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 HINT2Q9BX68 163 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 B3GNT5Q9BYG0 378 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 TUBB1Q9H4B7 451 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 MRPS30Q9NP92 439 aaKnown RBP11.01□□□□□ -0.65
U2AF1-209ENST00000475639 VNN3Q9NY84 501 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 VPS29Q9UBQ0 182 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 PCDHB11Q9Y5F2 797 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 AIPO00170 330 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 PAK4O96013 591 aaPredicted RBP11.01□□□□□ -0.65
U2AF1-209ENST00000475639 ZNF30P17039 623 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 DCTP40126 519 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 NFKB2Q00653 900 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 CXCL9Q07325 125 aa11.01□□□□□ -0.65
U2AF1-209ENST00000475639 MRPL49Q13405 166 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms