RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 LIX1Q8N485 282 aa18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 UHMK1Q8TAS1 419 aaKnown RBP18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 SELENOMQ8WWX9 145 aa18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 DIO2Q92813 273 aa18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 UCN3Q969E3 161 aa18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 ZNF597Q96LX8 424 aa18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 JSRP1Q96MG2 331 aaPredicted RBP18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 PROK2Q9HC23 129 aa18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 SLC24A3Q9HC58 644 aa18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 MCCC2Q9HCC0 563 aa18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 TRPS1Q9UHF7 1281 aa18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 PSME2Q9UL46 239 aa18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 CFL2Q9Y281 166 aa18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 PCDHA9Q9Y5H5 950 aa18.72■□□□□ 0.59
PDLIM4-206ENST00000474421 A8MT66 165 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 TOXO94900 526 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 SNX4O95219 450 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 PDYNP01213 254 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 GLI4P10075 376 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 IGFBP2P18065 325 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 NT5EP21589 574 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 MSX1P28360 303 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 DEKP35659 375 aaKnown RBP18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 TLE4Q04727 773 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 TFF3Q07654 80 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 C1orf185Q5T7R7 199 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 LETMD1Q6P1Q0 360 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 TIFABQ6ZNK6 161 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 ZNF615Q8N8J6 731 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 FAIM2Q9BWQ8 316 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 UCK2Q9BZX2 261 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 FAM215AQ9Y5M1 114 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 NPFFR2Q9Y5X5 522 aa18.71■□□□□ 0.59
PDLIM4-206ENST00000474421 NCKAP5O14513 1909 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 FREM3P0C091 2139 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 NKX2-6A6NCS4 301 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 LRRC3CA6NJW4 275 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 RFPL3SP0C7P2 107 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 HSD3B1P14060 373 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 CSNK2A2P19784 350 aaPredicted RBP18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 HSD3B2P26439 372 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 ZFP36L2P47974 494 aaKnown RBP18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 CDH13P55290 713 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 TRA2BP62995 288 aaKnown RBP18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 RASA2Q15283 850 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 TEX35Q5T0J7 233 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 SLC48A1Q6P1K1 146 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 TRMT10CQ7L0Y3 403 aaKnown RBP18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 VWA5B2Q8N398 1253 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 TMEM151AQ8N4L1 468 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 NEIL3Q8TAT5 605 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 ADIPOR1Q96A54 375 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 NPDC1Q9NQX5 325 aaPredicted RBP18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 FARSBQ9NSD9 589 aaKnown RBP18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 TNFRSF10DQ9UBN6 386 aa18.7■□□□□ 0.58
PDLIM4-206ENST00000474421 A0A1W2PS29 197 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 CDH16O75309 829 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 TRIM3O75382 744 aaPredicted RBP18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 KRT6AP02538 564 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 KRT6BP04259 564 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 ATP1B1P05026 303 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 SBK3P0C264 359 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 CT62P0C5K7 136 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 KRT15P19012 456 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 GDF1P27539 372 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 HSD17B3P37058 310 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 KRT6CP48668 564 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 FBXW4P57775 412 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 CLCQ05315 142 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 GALNT1Q10472 559 aaPredicted RBP18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 RTL6Q6ICC9 239 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 RPS27LQ71UM5 84 aaKnown RBP18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 PACS2Q86VP3 889 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 IFT20Q8IY31 132 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 CLYBLQ8N0X4 340 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 SPPL2AQ8TCT8 520 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 ALKBH4Q9NXW9 302 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 SPRR3Q9UBC9 169 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 VPS29Q9UBQ0 182 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 CES1P1Q9UKY3 287 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 STK38LQ9Y2H1 464 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 CCDC168Q8NDH2 2452 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 ARHGAP21Q5T5U3 1957 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 POLQO75417 2590 aa18.69■□□□□ 0.58
PDLIM4-206ENST00000474421 EXPH5Q8NEV8 1989 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 ANKRD17O75179 2603 aaKnown RBP18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 A0A1B0GTL3 188 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 PPP6CO00743 305 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 ERAL1O75616 437 aaKnown RBP18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 SUPT7LO94864 414 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 NAGAP17050 411 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 ENDOUP21128 410 aaKnown RBP18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 MAP4K2Q12851 820 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 TMEM64Q6YI46 380 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 DMRTC2Q8IXT2 367 aaPredicted RBP18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 CEP112Q8N8E3 955 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 KIF18AQ8NI77 898 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 TM4SF18Q96CE8 201 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 ZNF382Q96SR6 550 aa18.68■□□□□ 0.58
PDLIM4-206ENST00000474421 ANGPTL4Q9BY76 406 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms